RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 GRIA1P42261 906 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 XIAPP98170 497 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 GPS1Q13098 491 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 SEPT7Q16181 437 aaKnown RBP14.34□□□□□ -0.11
USP39-206ENST00000448971 MAP9Q49MG5 647 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 DET1Q7L5Y6 550 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 SNX20Q7Z614 316 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 ARL14Q8N4G2 192 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 SLC37A2Q8TED4 501 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 GRK7Q8WTQ7 553 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 STYXQ8WUJ0 223 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 MED8Q96G25 268 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 DCUN1D1Q96GG9 259 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 GFM1Q96RP9 751 aaKnown RBP14.34□□□□□ -0.11
USP39-206ENST00000448971 C19orf43Q9BQ61 176 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 TIMM29Q9BSF4 260 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 CASS4Q9NQ75 786 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 NLE1Q9NVX2 485 aaPredicted RBP14.34□□□□□ -0.11
USP39-206ENST00000448971 TRBV23OR9-2A0A075B6M9 112 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 CTAGE9A4FU28 777 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 PYCARD-AS1I3L0S3 204 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 ZW10O43264 779 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 EFSO43281 561 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 TCEA3O75764 348 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 F3P13726 295 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 FNTAP49354 379 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 CTSCP53634 463 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 SESN2P58004 480 aaPredicted RBP14.33□□□□□ -0.12
USP39-206ENST00000448971 LAMB3Q13751 1172 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 CYP1B1Q16678 543 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 TAS2R42Q7RTR8 314 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 SPRED1Q7Z699 444 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 CLEC14AQ86T13 490 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 ZNF547Q8IVP9 402 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 NXPE1Q8N323 547 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 RASGEF1AQ8N9B8 481 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.33□□□□□ -0.12
USP39-206ENST00000448971 CCDC97Q96F63 343 aaPredicted RBP14.33□□□□□ -0.12
USP39-206ENST00000448971 COPS8Q99627 209 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 FAM96AQ9H5X1 160 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 TBC1D29Q9UFV1 150 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 BSNQ9UPA5 3926 aa14.33□□□□□ -0.12
USP39-206ENST00000448971 D6RAR5 112 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 H7C0S8 307 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 AP3B1O00203 1094 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 EML2O95834 649 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 PNLIPP16233 465 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 TPSB2P20231 275 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 PDX1P52945 283 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 CCL7P80098 99 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 HHEXQ03014 270 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 CACNG1Q06432 222 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 CLN3Q13286 438 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 TPSAB1Q15661 275 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 SKIDA1Q1XH10 827 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 GPR33Q49SQ1 333 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 FNBP1LQ5T0N5 605 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 TSTD2Q5T7W7 516 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 TMEM220Q6QAJ8 160 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 AFTPHQ6ULP2 937 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 MICALCLQ6ZW33 695 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 SLC9B2Q86UD5 537 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 C17orf82Q86X59 251 aaPredicted RBP14.32□□□□□ -0.12
USP39-206ENST00000448971 TRIM48Q8IWZ4 208 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 SFRP1Q8N474 314 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 ZNF514Q96K75 400 aaPredicted RBP14.32□□□□□ -0.12
USP39-206ENST00000448971 RANBP9Q96S59 729 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 LRRN3Q9H3W5 708 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 CLMPQ9H6B4 373 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 PRDM8Q9NQV8 689 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 FAM8A1Q9UBU6 413 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 SLC23A2Q9UGH3 650 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 TCAF1Q9Y4C2 921 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 SAR1BQ9Y6B6 198 aa14.32□□□□□ -0.12
USP39-206ENST00000448971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 KIR2DS5A0A0G2JLQ3 304 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 A0A0G2JNG1 304 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 A0A1W2PQM1 296 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 MROH6A6NGR9 719 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 KIR2DS3K7RE56 304 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 PRSS56P0CW18 603 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 IDSP22304 550 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 ADRA1DP25100 572 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 ACRV1P26436 265 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 ALDH4A1P30038 563 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 ARSDP51689 593 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 CLCNKAP51800 687 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 DRG2P55039 364 aaKnown RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 PRAMEP78395 509 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 SARNPP82979 210 aaKnown RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 KCNC4Q03721 635 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 KIR2DS5Q14953 304 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 PPP1R7Q15435 360 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 AMZ1Q400G9 498 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 CCDC81Q6ZN84 652 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 AMZ2Q86W34 360 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 ZNF761Q86XN6 746 aaPredicted RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 BEND7Q8N7W2 519 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms