RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TMED2Q15363 201 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 PROX2Q3B8N5 592 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 SYTL3Q4VX76 610 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 C14orf28Q4W4Y0 310 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 HP1BP3Q5SSJ5 553 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-208ENST00000444533 ZNF470Q6ECI4 717 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 SLC9B2Q86UD5 537 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 NRROSQ86YC3 692 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 ANKMY2Q8IV38 441 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 IFT20Q8IY31 132 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 NOA1Q8NC60 698 aaKnown RBP13.87□□□□□ -0.19
SSBP3-208ENST00000444533 FBXO36Q8NEA4 188 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 GPR150Q8NGU9 434 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 OR2L2Q8NH16 312 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 BAHD1Q8TBE0 780 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-208ENST00000444533 HM13Q8TCT9 377 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 IFT81Q8WYA0 676 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 SH3KBP1Q96B97 665 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 LINC00615Q96LM1 132 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-208ENST00000444533 SAYSD1Q9NPB0 183 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 SPATS2LQ9NUQ6 558 aaKnown RBP13.87□□□□□ -0.19
SSBP3-208ENST00000444533 INTS10Q9NVR2 710 aaKnown RBP13.87□□□□□ -0.19
SSBP3-208ENST00000444533 FAM8A1Q9UBU6 413 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 PCDHB1Q9Y5F3 818 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 PCDHGA1Q9Y5H4 931 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 MYLKQ15746 1914 aa13.87□□□□□ -0.19
SSBP3-208ENST00000444533 SPAARA0A1B0GVQ0 90 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 GOLGA8KD6RF30 607 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 E5RI56 91 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 GOLGA8TH3BQL2 631 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 IFRD1O00458 451 aaPredicted RBP13.86□□□□□ -0.19
SSBP3-208ENST00000444533 KPNA5O15131 536 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 GP1BAP07359 652 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 PRSS56P0CW18 603 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 F3P13726 295 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 GLB1P16278 677 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 ACP1P24666 158 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 CTSCP53634 463 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 B4GALNT1Q00973 533 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 DMPKQ09013 629 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 CUL1Q13616 776 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 KRT33BQ14525 404 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 SEPT7Q16181 437 aaKnown RBP13.86□□□□□ -0.19
SSBP3-208ENST00000444533 MSS51Q4VC12 460 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 OGFOD3Q6PK18 319 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 CILP2Q8IUL8 1156 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 ZNF547Q8IVP9 402 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 SLC35F3Q8IY50 421 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 CFAP206Q8IYR0 622 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 CLDN19Q8N6F1 224 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 KYQ8NBH2 561 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 WDR48Q8TAF3 677 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 IFI44Q8TCB0 444 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 FBXO25Q8TCJ0 367 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 CDKL2Q92772 493 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 CXorf40BQ96DE9 158 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 FCRL3Q96P31 734 aaPredicted RBP13.86□□□□□ -0.19
SSBP3-208ENST00000444533 GRHL1Q9NZI5 618 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 TXNDC16Q9P2K2 825 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 PLEKHM1Q9Y4G2 1056 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 TEX264Q9Y6I9 313 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 LRP4O75096 1905 aa13.86□□□□□ -0.19
SSBP3-208ENST00000444533 COL5A1P20908 1838 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 ZCWPW2A0A1B0GU75 182 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 ESYT3A0FGR9 886 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 EME2A4GXA9 379 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 E7ESA3 106 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 LIN7AO14910 233 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 NUDT21O43809 227 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 BANF1O75531 89 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 ESR1P03372 595 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 APOA4P06727 396 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 GSTA2P09210 222 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 FTH1P19P0C7X4 201 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 GIMD1P0DJR0 217 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 RPL10P27635 214 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 ARCN1P48444 511 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 EIF3BP55884 814 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 ILF2Q12905 390 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 RPA4Q13156 261 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 DNAJC3Q13217 504 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 SMAD1Q15797 465 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 TYSND1Q2T9J0 566 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 HSP90AA5PQ58FG0 334 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 WASH2PQ6VEQ5 465 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 UNC5AQ6ZN44 842 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 EFL1Q7Z2Z2 1120 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 GPR156Q8NFN8 814 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 SEC14L1Q92503 715 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 ELMO1Q92556 727 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 TMEM159Q96B96 161 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 CERS2Q96G23 380 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 PWWP2AQ96N64 755 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 FMO2Q99518 471 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 L2HGDHQ9H9P8 463 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 WASH6PQ9NQA3 447 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 IARS2Q9NSE4 1012 aaKnown RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 NSMCE4AQ9NXX6 385 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms