RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 LDB2O43679 373 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 POP7O75817 140 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 SRP72O76094 671 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 C9P02748 559 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 TPH1P17752 444 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 LPOP22079 712 aaPredicted RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 LEPRP48357 1165 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 PPM1FP49593 454 aaPredicted RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 EPHA4P54764 986 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 CYP4F2P78329 520 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 DMPKQ09013 629 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 LY6DQ14210 128 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 GPR18Q14330 331 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 LDLRAP1Q5SW96 308 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 DUS1LQ6P1R4 473 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 WASH2PQ6VEQ5 465 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 FAM129CQ86XR2 697 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 AGBL5Q8NDL9 886 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 ZNF398Q8TD17 642 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 SGF29Q96ES7 293 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 DNAJC1Q96KC8 554 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 SPRY4Q9C004 299 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 ARNT2Q9HBZ2 717 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 SLC40A1Q9NP59 571 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 WASH6PQ9NQA3 447 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 SIDT1Q9NXL6 827 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 SLC39A1Q9NY26 324 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.67□□□□□ -0.78e-10■■■■■ 31.5
SF3A1-203ENST00000444440 PCDHGA3Q9Y5H0 932 aa10.67□□□□□ -0.7
SF3A1-203ENST00000444440 CFAP20Q9Y6A4 193 aaKnown RBP10.67□□□□□ -0.7
SF3A1-203ENST00000444440 TNRC6AQ8NDV7 1962 aaKnown RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ERVH48-1M5A8F1 160 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ZW10O43264 779 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 KIF1CO43896 1103 aaKnown RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ZNF189O75820 626 aaPredicted RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 UBXN7O94888 489 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 VIPP01282 170 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 SLC2A4P14672 509 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ETS1P14921 441 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 CSTF2P33240 577 aaKnown RBP eCLIP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 TNNT3P45378 269 aaPredicted RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ITGA9Q13797 1035 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 GTF2H3Q13889 308 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 SIX1Q15475 284 aaPredicted RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 OASLQ15646 514 aaKnown RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 RPE65Q16518 533 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 LINC00303Q3SY05 128 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 FNBP1LQ5T0N5 605 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 AGAP9Q5VTM2 703 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ZDHHC20Q5W0Z9 365 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 TIPARPQ7Z3E1 657 aaKnown RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 AMZ2Q86W34 360 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 LRRC8AQ8IWT6 810 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ZNF843Q8N446 348 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 GLIS1Q8NBF1 620 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 BRSK1Q8TDC3 778 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 NKD1Q969G9 470 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 SH3KBP1Q96B97 665 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 RTP4Q96DX8 246 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 TGM7Q96PF1 710 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 NRTNQ99748 197 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 DPYSL5Q9BPU6 564 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 STN1Q9H668 368 aaKnown RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 ASB8Q9H765 288 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 UCK1Q9HA47 277 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 GRPEL1Q9HAV7 217 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 FAM8A1Q9UBU6 413 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 GUCA1BQ9UMX6 200 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 AAR2Q9Y312 384 aaKnown RBP10.66□□□□□ -0.7
SF3A1-203ENST00000444440 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
SF3A1-203ENST00000444440 CCDC78A2IDD5 438 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 GOLGA6L9A6NEM1 432 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 C2orf81A6NN90 581 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 B4E171 279 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 PPFIA2O75334 1257 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 CCDC175P0C221 793 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 MSH3P20585 1137 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 IDSP22304 550 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 AKT1P31749 480 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 TSPAN7P41732 249 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 GRIA1P42261 906 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 CAPZBP47756 277 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 SH3BP2P78314 561 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 MC2RQ01718 297 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 RHDQ02161 417 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 PRPSAP1Q14558 356 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 PARP6Q2NL67 630 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 ZNF658BQ4V348 819 aaPredicted RBP10.65□□□□□ -0.7
SF3A1-203ENST00000444440 MANEAQ5SRI9 462 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 ARHGEF18Q6ZSZ5 1173 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 TRIM48Q8IWZ4 208 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 EXD3Q8N9H8 876 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 SPDYE1Q8NFV5 336 aaPredicted RBP10.65□□□□□ -0.7
SF3A1-203ENST00000444440 C1orf54Q8WWF1 131 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 C9orf72Q96LT7 481 aa10.65□□□□□ -0.7
SF3A1-203ENST00000444440 TTC25Q96NG3 672 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms