RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ZFC3H1O60293 1989 aaKnown RBP13.79□□□□□ -0.2
TREX1-202ENST00000444177 A6NCN8 305 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 USP27XA6NNY8 438 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.78□□□□□ -0.2
TREX1-202ENST00000444177 SRP72O76094 671 aaKnown RBP13.78□□□□□ -0.2
TREX1-202ENST00000444177 THRAP10827 490 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 SLC2A4P14672 509 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 ETS1P14921 441 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 ZNF7P17097 686 aaPredicted RBP13.78□□□□□ -0.2
TREX1-202ENST00000444177 TPH1P17752 444 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 MSH3P20585 1137 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 CD82P27701 267 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 CSTF2P33240 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
TREX1-202ENST00000444177 CA5AP35218 305 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 HHEXQ03014 270 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 NFATC2Q13469 925 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 POU6F1Q14863 301 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 LONRF2Q1L5Z9 754 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 MANEAQ5SRI9 462 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 VASH2Q86V25 355 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 ZNF547Q8IVP9 402 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 OR10G6Q8NH81 332 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 ZNF398Q8TD17 642 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 SGF29Q96ES7 293 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
TREX1-202ENST00000444177 DNAJC1Q96KC8 554 aaKnown RBP13.78□□□□□ -0.2
TREX1-202ENST00000444177 ASB8Q9H765 288 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 SARS2Q9NP81 518 aaKnown RBP13.78□□□□□ -0.2
TREX1-202ENST00000444177 RAB6BQ9NRW1 208 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 PDP2Q9P2J9 529 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 SLC23A2Q9UGH3 650 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 CRLS1Q9UJA2 301 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 PCDHGA3Q9Y5H0 932 aa13.78□□□□□ -0.2
TREX1-202ENST00000444177 CCDC78A2IDD5 438 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 CCL22O00626 93 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 CES2O00748 559 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 ZSCAN5DPP0CG00 497 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 F3P13726 295 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 PLA2G2AP14555 144 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 VCLP18206 1134 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 FDFT1P37268 417 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 HADHAP40939 763 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 ARSDP51689 593 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 CLCNKAP51800 687 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 MSLNQ13421 630 aaPredicted RBP13.77□□□□□ -0.21
TREX1-202ENST00000444177 CCNG2Q16589 344 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 PPP1R21Q6ZMI0 780 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 DET1Q7L5Y6 550 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 LINC00523Q86TU6 105 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 SLC9B2Q86UD5 537 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 SLC35F6Q8N357 371 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 RASGEF1AQ8N9B8 481 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 DNAAF3Q8N9W5 541 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 OR52K1Q8NGK4 314 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 PMEPA1Q969W9 287 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 SH3KBP1Q96B97 665 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 MED8Q96G25 268 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 PBKQ96KB5 322 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 ETNK1Q9HBU6 452 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 PRDM8Q9NQV8 689 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 OCIAD1Q9NX40 245 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 SLC39A1Q9NY26 324 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 PAK5Q9P286 719 aa13.77□□□□□ -0.21
TREX1-202ENST00000444177 SETXQ7Z333 2677 aaKnown RBP13.77□□□□□ -0.21
TREX1-202ENST00000444177 KIR2DS5A0A0G2JLQ3 304 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 A0A0G2JNG1 304 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 OR2AG2A6NM03 316 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 OR5K4A6NMS3 321 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 ERI2A8K979 691 aaKnown RBP13.76□□□□□ -0.21
TREX1-202ENST00000444177 STMND1H3BQB6 276 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 KIR2DS3K7RE56 304 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 LDB2O43679 373 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 DUX1O43812 170 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 GAS8O95995 478 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 WT1P19544 449 aaPredicted RBP13.76□□□□□ -0.21
TREX1-202ENST00000444177 ITGALP20701 1170 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 PBLDP30039 288 aaPredicted RBP13.76□□□□□ -0.21
TREX1-202ENST00000444177 MC4RP32245 332 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 MAPK9P45984 424 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 CTSCP53634 463 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 XIAPP98170 497 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 SEMA5AQ13591 1074 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 KIR2DS5Q14953 304 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 LINC00303Q3SY05 128 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 TMEM220Q6QAJ8 160 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 WDR74Q6RFH5 385 aaPredicted RBP13.76□□□□□ -0.21
TREX1-202ENST00000444177 TRIM48Q8IWZ4 208 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 GLIS1Q8NBF1 620 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 JPH3Q8WXH2 748 aaPredicted RBP13.76□□□□□ -0.21
TREX1-202ENST00000444177 NCSTNQ92542 709 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 ART4Q93070 314 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 ULK4Q96C45 1275 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 ZKSCAN5Q9Y2L8 839 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 B3GALT1Q9Y5Z6 326 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 SLC30A1Q9Y6M5 507 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 SDK2Q58EX2 2172 aa13.76□□□□□ -0.21
TREX1-202ENST00000444177 EFCAB7A8K855 629 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms