RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 HMGCLP35914 325 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 MAPK9P45984 424 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 FASLGP48023 281 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 DCDC1P59894 354 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 EIF3EP60228 445 aaKnown RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 XRCC4Q13426 336 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 NR1D2Q14995 579 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 C16orf72Q14CZ0 275 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CYP1B1Q16678 543 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CLPPQ16740 277 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 SNAP47Q5SQN1 464 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF648Q5T619 568 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 PDPK2PQ6A1A2 396 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 C8orf74Q6P047 294 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 DRICH1Q6PGQ1 229 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 SLC9B2Q86UD5 537 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF567Q8N184 647 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 BLOC1S5Q8TDH9 187 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 USP7Q93009 1102 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 SH3KBP1Q96B97 665 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CCDC74BQ96LY2 380 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CCNL2Q96S94 520 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 HERPUD2Q9BSE4 406 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 RBCK1Q9BYM8 510 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 TRABDQ9H4I3 376 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 RSPH14Q9UHP6 348 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 PCYT1BQ9Y5K3 369 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 PRAMEF33A0A0G2JMD5 474 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TCRBV7S2A1N4TA0A589 114 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 PDZK1P1A8MUH7 402 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 GPR89AB7ZAQ6 455 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 HGSO14964 777 aaPredicted RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 PRAMEF10O60809 474 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 EML2O95834 649 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 GPR89BP0CG08 455 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 F3P13726 295 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 CD68P34810 354 aaPredicted RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 LIMK2P53671 638 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 CLN3Q13286 438 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 GTF2H3Q13889 308 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 DHX34Q14147 1143 aaKnown RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TGIF1Q15583 401 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 PLA2G4EQ3MJ16 856 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 IYDQ6PHW0 289 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 CCDC137Q6PK04 289 aaKnown RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF574Q6ZN55 896 aaPredicted RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 GLT6D1Q7Z4J2 308 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 MAATS1Q7Z4T9 603 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 FAM129CQ86XR2 697 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 KLHL7Q8IXQ5 586 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 PRELID2Q8N945 189 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 AGBL5Q8NDL9 886 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 OR4D9Q8NGE8 314 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 C1orf54Q8WWF1 131 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TADA1Q96BN2 335 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 QKIQ96PU8 341 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 FCRL5Q96RD9 977 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 DPYSL5Q9BPU6 564 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SARS2Q9NP81 518 aaKnown RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TRHDEQ9UKU6 1024 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF148Q9UQR1 794 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 PKP3Q9Y446 797 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SPO11Q9Y5K1 396 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 KIR2DS5A0A0G2JLQ3 304 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 A0A0G2JNG1 304 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 OR5K4A6NMS3 321 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 EFCAB8A8MWE9 144 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 KIR2DS3K7RE56 304 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 LIASO43766 372 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 EPOP01588 193 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 RBP3P10745 1247 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 LIPCP11150 499 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 CCL4P13236 92 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 HLA-DPA1P20036 260 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 ETV5P41161 510 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 CHRNA4P43681 627 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 RHDQ02161 417 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 MPP3Q13368 585 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SQSTM1Q13501 440 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TRA2AQ13595 282 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 KIR2DS5Q14953 304 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SIX1Q15475 284 aaPredicted RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SLC1A5Q15758 541 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SEPT7Q16181 437 aaKnown RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 C21orf62-AS1Q17RA5 79 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 ATP13A5Q4VNC0 1218 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SIRPB2Q5JXA9 342 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 ZDHHC20Q5W0Z9 365 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TMEM71Q6P5X7 295 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 DARS2Q6PI48 645 aaKnown RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 GSTA5Q7RTV2 222 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 LRRTM4Q86VH4 590 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TRAPPC5Q8IUR0 188 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 TRIM48Q8IWZ4 208 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 AVL9Q8NBF6 648 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 SPDYE1Q8NFV5 336 aaPredicted RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 MYRIPQ8NFW9 859 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 ATG4AQ8WYN0 398 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 NCSTNQ92542 709 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 PLEKHG4BQ96PX9 1271 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms