RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 GDF6Q6KF10 455 aaPredicted RBP16.62■□□□□ 0.25
PMS1-213ENST00000441310 BBIP1A8MTZ0 92 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 STMN1P16949 149 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 DPYSL2Q16555 572 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 KIAA0319Q5VV43 1072 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 CYHR1Q6ZMK1 362 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 HFE2Q6ZVN8 426 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 LARP4Q71RC2 724 aaKnown RBP eCLIP16.62■□□□□ 0.25
PMS1-213ENST00000441310 IL17RDQ8NFM7 739 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 MCOLN3Q8TDD5 553 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.62■□□□□ 0.25
PMS1-213ENST00000441310 ZHX1-C8orf76Q96EF9 292 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 MAP6Q96JE9 813 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 PRDM12Q9H4Q4 367 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 AKTIPQ9H8T0 292 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 EML4Q9HC35 981 aaKnown RBP16.62■□□□□ 0.25
PMS1-213ENST00000441310 PRDM8Q9NQV8 689 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 MEN1O00255 615 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 MTSS1O43312 755 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 PTTG1O95997 202 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 GABARAPL2P60520 117 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 RAB10P61026 200 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 KCNAB2Q13303 367 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 PSMD5Q16401 504 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 PRR23CQ6ZRP0 262 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 NLGN4XQ8N0W4 816 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 CRYBG2Q8N1P7 616 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 TMEM125Q96AQ2 219 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 LGALS12Q96DT0 336 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 ITCHQ96J02 903 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 ZNF717Q9BY31 904 aaPredicted RBP16.61■□□□□ 0.25
PMS1-213ENST00000441310 QPCTLQ9NXS2 382 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 FAM95CA0A1B0GW59 222 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 CYP2C18P33260 490 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 GRK3P35626 688 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 GPLD1P80108 840 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 TJAP1Q5JTD0 557 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 SYPL2Q5VXT5 272 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 ARHGAP17Q68EM7 881 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 MFSD6LQ8IWD5 586 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.61■□□□□ 0.25
PMS1-213ENST00000441310 JPH3Q8WXH2 748 aaPredicted RBP16.61■□□□□ 0.25
PMS1-213ENST00000441310 ZNF300Q96RE9 604 aaPredicted RBP16.61■□□□□ 0.25
PMS1-213ENST00000441310 RPRD1BQ9NQG5 326 aaKnown RBP16.61■□□□□ 0.25
PMS1-213ENST00000441310 PCDHA9Q9Y5H5 950 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
PMS1-213ENST00000441310 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 CCDC154A6NI56 674 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 UPK1AO00322 258 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 NDST3O95803 873 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 SULT1E1P49888 294 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 SCNN1GP51170 649 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 SV2CQ496J9 727 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 RGMBQ6NW40 437 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 NEK10Q6ZWH5 1172 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 AGO3Q9H9G7 860 aaKnown RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 STMN3Q9NZ72 180 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 ARIH1Q9Y4X5 557 aaPredicted RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 M0QZ92 97 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 POMCP01189 267 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 AKR1A1P14550 325 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 ARL4AP40617 200 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 LAPTM5Q13571 262 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 CDONQ4KMG0 1287 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 NXNL2Q5VZ03 156 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 CYP20A1Q6UW02 462 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 SLC26A9Q7LBE3 791 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 ZDHHC13Q8IUH4 622 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 TP53I13Q8NBR0 393 aaPredicted RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 C3orf58Q8NDZ4 430 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 C19orf60Q96EN9 201 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 SENP8Q96LD8 212 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 VPS35Q96QK1 796 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 MBOAT4Q96T53 435 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 DHRS9Q9BPW9 319 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 MYBPHLA2RUH7 354 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 A8MT66 165 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 H0Y626 953 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 UBFD1O14562 309 aaKnown RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 TRIM16O95361 564 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 FADS2O95864 444 aaKnown RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 KRT6AP02538 564 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 KRT6BP04259 564 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 KCNE1P15382 129 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 FMO3P31513 532 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 MTHFRP42898 656 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 TAS2R39P59534 338 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 GRB7Q14451 532 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 NPTX1Q15818 432 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 ZNF544Q6NX49 715 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 PSTKQ8IV42 348 aaKnown RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 MIER2Q8N344 545 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 PAPD5Q8NDF8 572 aaKnown RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 MRPL57Q9BQC6 102 aaKnown RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 FEM1AQ9BSK4 669 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 SLAMF8Q9P0V8 285 aa16.6■□□□□ 0.25
PMS1-213ENST00000441310 INTS6Q9UL03 887 aaKnown RBP16.6■□□□□ 0.25
PMS1-213ENST00000441310 HACD1B0YJ81 288 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms