RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 OTUD4Q01804 1114 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF177Q13360 481 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 SNX1Q13596 522 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 AUHQ13825 339 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 SPIDRQ14159 915 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 PAFAH1B3Q15102 231 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 NOMO1Q15155 1222 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TRADDQ15628 312 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 OASLQ15646 514 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 CCNG2Q16589 344 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ERCC6LQ2NKX8 1250 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 C5orf22Q49AR2 442 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 AFMIDQ63HM1 303 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 NUGGCQ68CJ6 796 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF776Q68DI1 518 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ZCCHC8Q6NZY4 707 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 RFWD3Q6PCD5 774 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 NCEH1Q6PIU2 408 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TPGS1Q6ZTW0 290 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TADA2BQ86TJ2 420 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 CHSY1Q86X52 802 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 SPATS2Q86XZ4 545 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 DENND1CQ8IV53 801 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 MAP7D3Q8IWC1 876 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ARHGAP12Q8IWW6 846 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 MCEMP1Q8IX19 187 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 FAM217AQ8IXS0 508 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 LGI2Q8N0V4 545 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TAB3Q8N5C8 712 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ATP6V0D2Q8N8Y2 350 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 LINC01356Q8N9X3 169 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 OR52K2Q8NGK3 314 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 CPT1CQ8TCG5 803 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 MAGOHBQ96A72 148 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TBC1D31Q96DN5 1066 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 BTN2A3PQ96KV6 586 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 C1orf74Q96LT6 269 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 C5orf34Q96MH7 638 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 OLFM3Q96PB7 478 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TRIM51Q9BSJ1 452 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 SLC29A3Q9BZD2 475 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 CIPCQ9C0C6 399 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 NACA2Q9H009 215 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 NOL6Q9H6R4 1146 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 LRRC19Q9H756 370 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ANKZF1Q9H8Y5 726 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 FBXL12Q9NXK8 326 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 DTLQ9NZJ0 730 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 MPP6Q9NZW5 540 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 KLHL14Q9P2G3 628 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 PPARGC1AQ9UBK2 798 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 AMACRQ9UHK6 382 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 STOML2Q9UJZ1 356 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 FBXO10Q9UK96 956 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ITGB1BP2Q9UKP3 347 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 DNPEPQ9ULA0 475 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 VANGL2Q9ULK5 521 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 PLA2G4CQ9UP65 541 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 DMTF1Q9Y222 760 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 MDC1Q14676 2089 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 NYNRINQ9P2P1 1898 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 GOLGA6L10A0A0M3HER8 536 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 ARHGAP10A1A4S6 786 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CPED1A4D0V7 1026 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF891A8MT65 544 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 SCAMP1O15126 338 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 TTI1O43156 1089 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 RNASEH1O60930 286 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 PIAS2O75928 621 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 LATS1O95835 1130 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 C8BP07358 591 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 RHOXF2BP0C7M4 288 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 PRF1P14222 555 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 ETS1P14921 441 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 WT1P19544 449 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CHRNA3P32297 505 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CETN2P41208 172 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 FNTAP49354 379 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF135P52742 658 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 RPS24P62847 133 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 SLC7A5Q01650 507 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 GALNT2Q10471 571 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 TFDP2Q14188 446 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 STAT4Q14765 748 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 GEN1Q17RS7 908 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 FNDC3BQ53EP0 1204 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 ODF2Q5BJF6 829 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 RWDD4Q6NW29 188 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 DRICH1Q6PGQ1 229 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CCDC137Q6PK04 289 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 ARHGAP36Q6ZRI8 547 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CEP128Q6ZU80 1094 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 EFL1Q7Z2Z2 1120 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 GDF7Q7Z4P5 450 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 PRPF39Q86UA1 669 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 UNC45BQ8IWX7 931 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CFAP52Q8N1V2 620 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 RTL3Q8N8U3 475 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 WFDC5Q8TCV5 224 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms