RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PPP2CBP62714 309 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 RPS21P63220 83 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PPP2CAP67775 309 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TIAL1Q01085 375 aaKnown RBP eCLIP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 DPTQ07507 201 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 WSCD2Q2TBF2 565 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 ZNF284Q2VY69 593 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 RBM20Q5T481 1227 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 LGSNQ5TDP6 509 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3GQ6DHY5 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3CQ6IPX1 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 NEK5Q6P3R8 708 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CERS6Q6ZMG9 384 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3Q8IZP1 549 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 NXPE1Q8N323 547 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 DCLK2Q8N568 766 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 GOLGA6L1Q8N7Z2 621 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 FRMD1Q8N878 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PLA2G15Q8NCC3 412 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 GABPB2Q8TAK5 448 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 BTN2A2Q8WVV5 523 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 ISL2Q96A47 359 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CENPTQ96BT3 561 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 AP2M1Q96CW1 435 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 MTBPQ96DY7 904 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 NUS1Q96E22 293 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 VPS39Q96JC1 886 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 BIRC8Q96P09 236 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 UHRF1Q96T88 793 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 NDNQ99608 321 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 KLF6Q99612 283 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 GPR22Q99680 433 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 BOCQ9BWV1 1114 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 SPATA16Q9BXB7 569 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 P2RY12Q9H244 342 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CAB39LQ9H9S4 337 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PREBQ9HCU5 417 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 MED4Q9NPJ6 270 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 MBNL1Q9NR56 388 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 INTS10Q9NVR2 710 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 SMOXQ9NWM0 555 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CRLS1Q9UJA2 301 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CNOT6Q9ULM6 557 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CRYL1Q9Y2S2 319 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 EYSQ5T1H1 3165 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 SHROOM3Q8TF72 1996 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 MYO9BQ13459 2157 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 C5orf42Q9H799 3197 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 IGLV3-16A0A075B6K0 115 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM95CA0A1B0GW59 222 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 PRR23AA6NEV1 266 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM47DPA6NHR8 397 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 HMGB1P1B2RPK0 211 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 GOLGA8RI6L899 631 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TPP1O14773 563 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 MT-ND3P03897 115 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 KRT15P19012 456 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 AOC1P19801 751 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 MAT2AP31153 395 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 FMO4P31512 558 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 GMPRP36959 345 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 MAGEA12P43365 314 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CXCL12P48061 93 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 POLD2P49005 469 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TTPAP49638 278 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CLCN5P51795 746 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 ADARP55265 1226 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CDKN2DP55273 166 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TAS2R39P59534 338 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 MAGOHP61326 146 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 B4GALNT1Q00973 533 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 DMWDQ09019 674 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 DNAJC3Q13217 504 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 GPS2Q13227 327 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 ITGA9Q13797 1035 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 KHDC1Q4VXA5 237 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 SETMARQ53H47 684 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 HSP90B2PQ58FF3 399 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 PPM1JQ5JR12 505 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 AARS2Q5JTZ9 985 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CTSL3PQ5NE16 218 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 ZNF648Q5T619 568 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 GPRC6AQ5T6X5 926 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 HECTD2Q5U5R9 776 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 LYPLAL1Q5VWZ2 237 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 KIAA1161Q6NSJ0 714 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 PNCKQ6P2M8 343 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 KDM7AQ6ZMT4 941 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TAOK1Q7L7X3 1001 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CMC1Q7Z7K0 106 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TRIM69Q86WT6 500 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 HORMAD1Q86X24 394 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC41A1Q8IVJ1 513 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CEP97Q8IW35 865 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 SRRM1Q8IYB3 904 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CAMKK1Q8N5S9 505 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 CLDN19Q8N6F1 224 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 GPATCH11Q8N954 259 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TP53I13Q8NBR0 393 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 DDHD1Q8NEL9 900 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms