RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CTSCP53634 463 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 DCDC1P59894 354 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 MRPS25P82663 173 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 SHC2P98077 582 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CYP4F3Q08477 520 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ILKQ13418 452 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 SPIDRQ14159 915 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PPP1R7Q15435 360 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 SKIDA1Q1XH10 827 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 LDLRAP1Q5SW96 308 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 NKAIN2Q5VXU1 208 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ANKRD22Q5VYY1 191 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZDHHC20Q5W0Z9 365 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PAPD7Q5XG87 772 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PDPK2PQ6A1A2 396 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 IYDQ6PHW0 289 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 C4orf22Q6V702 233 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 SNX20Q7Z614 316 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 LDB1Q86U70 411 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 SERPINA9Q86WD7 417 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 TMPRSS12Q86WS5 348 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CREG2Q8IUH2 290 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRAPPC5Q8IUR0 188 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF547Q8IVP9 402 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CFAP206Q8IYR0 622 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PPHLN1Q8NEY8 458 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR6P1Q8NGX9 317 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 MDM1Q8TC05 714 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 STYXQ8WUJ0 223 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 HDAC10Q969S8 669 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 DCUN1D1Q96GG9 259 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 GFM1Q96RP9 751 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC38A3Q99624 504 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 NAPGQ99747 312 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 FOXP3Q9BZS1 431 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 DDX47Q9H0S4 455 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 LRRN3Q9H3W5 708 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 RDH14Q9HBH5 336 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CASS4Q9NQ75 786 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 NLE1Q9NVX2 485 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZDHHC3Q9NYG2 299 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 NCKIPSDQ9NZQ3 722 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 GMPR2Q9P2T1 348 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 FEZ2Q9UHY8 353 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PCDHB1Q9Y5F3 818 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ARHGEF17Q96PE2 2063 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 GOLGA6L10A0A0M3HER8 536 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 HEATR9A2RTY3 570 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 MROH6A6NGR9 719 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 A8MU76 341 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 FANCGO15287 622 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NUDT21O43809 227 aaKnown RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 PHF2O75151 1096 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 GOT2P00505 430 aaKnown RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 MPOP05164 745 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 RALBP11234 206 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 F3P13726 295 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ATP1B2P14415 290 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 GLB1P16278 677 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ITGB6P18564 788 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ITGALP20701 1170 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NMBRP28336 390 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF140P52738 457 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 SARNPP82979 210 aaKnown RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 B4GALNT1Q00973 533 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NFATC2Q13469 925 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 LRP8Q14114 963 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NFE2L1Q14494 772 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 HLTFQ14527 1009 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CLCA4Q14CN2 919 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 BRD3Q15059 726 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CYP1B1Q16678 543 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPR33Q49SQ1 333 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 FASTKD1Q53R41 847 aaKnown RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ARSJQ5FYB0 599 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 PCID2Q5JVF3 399 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 SNAP47Q5SQN1 464 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 HP1BP3Q5SSJ5 553 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 TSTD2Q5T7W7 516 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CDCP2Q5VXM1 449 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CASC4Q6P4E1 433 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 LRRC8BQ6P9F7 803 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 UNQ6494/PRO21346Q6UXR6 183 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NAPRTQ6XQN6 538 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 SYT10Q6XYQ8 523 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 FAM83HQ6ZRV2 1179 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF534Q76KX8 674 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 C11orf96Q7Z7L8 435 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC9B2Q86UD5 537 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 AMZ2Q86W34 360 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCNJLQ8IV13 435 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 KLHDC8BQ8IXV7 354 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ALDH16A1Q8IZ83 802 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NXPE1Q8N323 547 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 MPP5Q8N3R9 675 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CLDN19Q8N6F1 224 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 DDHD1Q8NEL9 900 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR6C4Q8NGE1 309 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 DTX3LQ8TDB6 740 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC37A2Q8TED4 501 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms