RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 AKAP7Q9P0M2 348 aaPredicted RBP9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 TMEM9Q9P0T7 183 aa9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 SCHIP1Q9P0W5 487 aaPredicted RBP9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CPNE7Q9UBL6 633 aa9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FAM8A1Q9UBU6 413 aa9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CRLS1Q9UJA2 301 aa9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ZNF148Q9UQR1 794 aa9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ZFHX4Q86UP3 3567 aa9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ANKRD11Q6UB99 2663 aaPredicted RBP9.07□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ZFYVE26Q68DK2 2539 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 DMXL2Q8TDJ6 3036 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CFAP47Q6ZTR5 3102 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 IGHV5-10-1A0A0J9YXX1 117 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 GOLGA6L3A6NEY3 463 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 PRR19A6NJB7 356 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 OR5K4A6NMS3 321 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 OR52A4PA6NMU1 304 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CDRT15L2A8MXV6 281 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 E7EVH7 732 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 KLK10O43240 276 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 LDB2O43679 373 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 VIPP01282 170 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 THRAP10827 490 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ETS1P14921 441 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 RPL10P27635 214 aaKnown RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 MC4RP32245 332 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ETV5P41161 510 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 LMAN1P49257 510 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 MAPK10P53779 464 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 UBE2IP63279 158 aaKnown RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 GPLD1P80108 840 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 PDE1BQ01064 536 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CFHR1Q03591 330 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 TLE3Q04726 772 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 MSLNQ13421 630 aaPredicted RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CLPPQ16740 277 aaPredicted RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 LONRF2Q1L5Z9 754 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 SNAP47Q5SQN1 464 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FNBP1LQ5T0N5 605 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 TMEM220Q6QAJ8 160 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 PPP1R21Q6ZMI0 780 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ZNF574Q6ZN55 896 aaPredicted RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 C11orf96Q7Z7L8 435 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CLEC14AQ86T13 490 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 AMZ2Q86W34 360 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 BPHLQ86WA6 291 aaPredicted RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 BEND7Q8N7W2 519 aaPredicted RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 OR4D9Q8NGE8 314 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 UBE2Q2Q8WVN8 375 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 SH3KBP1Q96B97 665 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ULK4Q96C45 1275 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CCDC97Q96F63 343 aaPredicted RBP9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 DCUN1D1Q96GG9 259 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 TBC1D10AQ9BXI6 508 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 TLR10Q9BXR5 811 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FAM96AQ9H5X1 160 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ARNT2Q9HBZ2 717 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ASXL3Q9C0F0 2248 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CELSR3Q9NYQ7 3312 aa9.06□□□□□ -0.96
RFX3-AS1-202ENST00000427722 PRAMEF33A0A0G2JMD5 474 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 LILRA5A6NI73 299 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 PSMD3O43242 534 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CEP104O60308 925 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 PRAMEF10O60809 474 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 POP7O75817 140 aaKnown RBP9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FGGP02679 453 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ZSCAN5DPP0CG00 497 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CCL4P13236 92 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 BRAFP15056 766 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 IDSP22304 550 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 SLC5A2P31639 672 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 STIP1P31948 543 aaKnown RBP9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CXCR5P32302 372 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FDFT1P37268 417 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 HADHAP40939 763 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 HALP42357 657 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 LIMK2P53671 638 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 EPHA4P54764 986 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 XIAPP98170 497 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 NFE2L1Q14494 772 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 SIX1Q15475 284 aaPredicted RBP9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CCDC38Q502W7 563 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 ZRANB3Q5FWF4 1079 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FAM83HQ6ZRV2 1179 aaPredicted RBP9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 LINC00523Q86TU6 105 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FAM129CQ86XR2 697 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 NXPE1Q8N323 547 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 DNAAF3Q8N9W5 541 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 GLIS1Q8NBF1 620 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 OR52K1Q8NGK4 314 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 USP7Q93009 1102 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 TMEM159Q96B96 161 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CXorf40BQ96DE9 158 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 SGF29Q96ES7 293 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 FCRL3Q96P31 734 aaPredicted RBP9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CDK15Q96Q40 435 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 DPYSL5Q9BPU6 564 aa9.05□□□□□ -0.96
RFX3-AS1-202ENST00000427722 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms