RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TDRD15B5MCY1 1934 aaKnown RBP4.02□□□□□ -1.77
LINC01040-201ENST00000425048 IGHV4-61A0A0C4DH41 118 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 TEX13DA0A0J9YY54 714 aaPredicted RBP4.02□□□□□ -1.77
LINC01040-201ENST00000425048 IGHV4-59P01825 116 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 EIF3BP55884 814 aaKnown RBP4.02□□□□□ -1.77
LINC01040-201ENST00000425048 TLE2Q04725 743 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 GALNT2Q10471 571 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 PTP4A2Q12974 167 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 MFAP5Q13361 173 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 OS9Q13438 667 aaPredicted RBP4.02□□□□□ -1.77
LINC01040-201ENST00000425048 PRICKLE4Q2TBC4 344 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 PAQR6Q6TCH4 344 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 SLC16A9Q7RTY1 509 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 LRRTM1Q86UE6 522 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 LRRTM4Q86VH4 590 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 SEMA4DQ92854 862 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 OMA1Q96E52 524 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 P2RY12Q9H244 342 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 PELI2Q9HAT8 420 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 ABI3Q9P2A4 366 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC01040-201ENST00000425048 ZNF318Q5VUA4 2279 aa4.02□□□□□ -1.77
LINC01040-201ENST00000425048 OR6C76A6NM76 312 aa4.01□□□□□ -1.77
LINC01040-201ENST00000425048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.01□□□□□ -1.77
LINC01040-201ENST00000425048 VAMP2P63027 116 aa4.01□□□□□ -1.77
LINC01040-201ENST00000425048 PSRC1Q6PGN9 363 aaPredicted RBP4.01□□□□□ -1.77
LINC01040-201ENST00000425048 SDCCAG8Q86SQ7 713 aaPredicted RBP4.01□□□□□ -1.77
LINC01040-201ENST00000425048 ANKRD18AQ8IVF6 992 aa4.01□□□□□ -1.77
LINC01040-201ENST00000425048 GPALPP1Q8IXQ4 340 aa4.01□□□□□ -1.77
LINC01040-201ENST00000425048 GPATCH1Q9BRR8 931 aaKnown RBP4.01□□□□□ -1.77
LINC01040-201ENST00000425048 DLGAP2Q9P1A6 1054 aa4.01□□□□□ -1.77
LINC01040-201ENST00000425048 CNOT8Q9UFF9 292 aaKnown RBP4.01□□□□□ -1.77
LINC01040-201ENST00000425048 TMEM184BQ9Y519 407 aaPredicted RBP4.01□□□□□ -1.77
LINC01040-201ENST00000425048 CAPN7Q9Y6W3 813 aa4.01□□□□□ -1.77
LINC01040-201ENST00000425048 IGLV9-49A0A0B4J1Y8 123 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 EIF3FO00303 357 aaPredicted RBP4□□□□□ -1.77
LINC01040-201ENST00000425048 ATP2A1O14983 1001 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 DUS4LO95620 317 aaKnown RBP4□□□□□ -1.77
LINC01040-201ENST00000425048 ICAM1P05362 532 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 HNRNPA1P09651 372 aaKnown RBP eCLIP4□□□□□ -1.77
LINC01040-201ENST00000425048 CKMT2P17540 419 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 ZBED6P86452 979 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 HNRNPDQ14103 355 aaKnown RBP4□□□□□ -1.77
LINC01040-201ENST00000425048 SGSM1Q2NKQ1 1148 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 FAM69AQ5T7M9 428 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 CYP4A22Q5TCH4 519 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 LDHAL6AQ6ZMR3 332 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 LSMEM2Q8N112 164 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 OR2L2Q8NH16 312 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 HVCN1Q96D96 273 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 PIGMQ9H3S5 423 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 RCC2Q9P258 522 aaKnown RBP4□□□□□ -1.77
LINC01040-201ENST00000425048 LRWD1Q9UFC0 647 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 CAMK2AQ9UQM7 478 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 GPR52Q9Y2T5 361 aa4□□□□□ -1.77
LINC01040-201ENST00000425048 CCDC194A0A1B0GVG4 234 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 A0A1W2PRG0 241 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 ZBTB43O43298 467 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 TNFSF14O43557 240 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 TCEA3O75764 348 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 PRG2P13727 222 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 HRH2P25021 359 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 HNF4AP41235 474 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 THOP1P52888 689 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 CDH11P55287 796 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 MS4A2Q01362 244 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 TAF12Q16514 161 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 CDC73Q6P1J9 531 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 FLRT3Q9NZU0 649 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 CWC15Q9P013 229 aaKnown RBP3.99□□□□□ -1.77
LINC01040-201ENST00000425048 LIMA1Q9UHB6 759 aaKnown RBP3.99□□□□□ -1.77
LINC01040-201ENST00000425048 MKLN1Q9UL63 735 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 SLC7A7Q9UM01 511 aa3.99□□□□□ -1.77
LINC01040-201ENST00000425048 OR2M5A3KFT3 312 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 ZNF197O14709 1029 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 CDC123O75794 336 aaPredicted RBP3.98□□□□□ -1.77
LINC01040-201ENST00000425048 MRPS34P82930 218 aaKnown RBP3.98□□□□□ -1.77
LINC01040-201ENST00000425048 CDR2Q01850 454 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 TRPC3Q13507 836 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 GRAPQ13588 217 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 P2RY6Q15077 328 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 TAF1BQ53T94 588 aaPredicted RBP3.98□□□□□ -1.77
LINC01040-201ENST00000425048 C2CD6Q53TS8 623 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 SLC25A30Q5SVS4 291 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 CCDC190Q86UF4 302 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 DNAJC22Q8N4W6 341 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 LRRC61Q9BV99 259 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 CLEC7AQ9BXN2 247 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 SEMA6AQ9H2E6 1030 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 INTS9Q9NV88 658 aaKnown RBP3.98□□□□□ -1.77
LINC01040-201ENST00000425048 RNF186Q9NXI6 227 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 FBXW11Q9UKB1 542 aa3.98□□□□□ -1.77
LINC01040-201ENST00000425048 KPNA7A9QM74 516 aa3.97□□□□□ -1.77
LINC01040-201ENST00000425048 UGT1A4P22310 534 aa3.97□□□□□ -1.77
LINC01040-201ENST00000425048 CBLP22681 906 aa3.97□□□□□ -1.77
LINC01040-201ENST00000425048 PGFP49763 221 aa3.97□□□□□ -1.77
LINC01040-201ENST00000425048 ELAVL2Q12926 359 aaKnown RBP3.97□□□□□ -1.77
LINC01040-201ENST00000425048 ZNF343Q6P1L6 599 aa3.97□□□□□ -1.77
LINC01040-201ENST00000425048 C11orf53Q8IXP5 236 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms