RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 IDSP22304 550 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 AKT1P31749 480 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 MC4RP32245 332 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 EPHA4P54764 986 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 TRA2AQ13595 282 aaKnown RBP eCLIP18.7■□□□□ 0.58
SF3A1-202ENST00000411423 WDR74Q6RFH5 385 aaPredicted RBP18.7■□□□□ 0.58
SF3A1-202ENST00000411423 ARHGAP22Q7Z5H3 698 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 AMZ2Q86W34 360 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 BMPERQ8N8U9 685 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
SF3A1-202ENST00000411423 SH3KBP1Q96B97 665 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 STN1Q9H668 368 aaKnown RBP18.7■□□□□ 0.58
SF3A1-202ENST00000411423 UCK1Q9HA47 277 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 SLC40A1Q9NP59 571 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 NLE1Q9NVX2 485 aaPredicted RBP18.7■□□□□ 0.58
SF3A1-202ENST00000411423 FEZ2Q9UHY8 353 aaPredicted RBP18.7■□□□□ 0.58
SF3A1-202ENST00000411423 TRBV5-4A0A0C4DH59 114 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 VIPP01282 170 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 IFNB1P01574 187 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 PSMA3P25788 255 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 STIP1P31948 543 aaKnown RBP18.69■□□□□ 0.58
SF3A1-202ENST00000411423 CXCR5P32302 372 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 SEPT6Q14141 434 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 GPR18Q14330 331 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 RPE65Q16518 533 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 CCDC38Q502W7 563 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 DUS1LQ6P1R4 473 aaKnown RBP18.69■□□□□ 0.58
SF3A1-202ENST00000411423 PCSK4Q6UW60 755 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 SNX20Q7Z614 316 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 PIANPQ8IYJ0 282 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 NXPE1Q8N323 547 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 RSC1A1Q92681 617 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 DPYSL5Q9BPU6 564 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.69■□□□□ 0.58
SF3A1-202ENST00000411423 ZCCHC2Q9C0B9 1178 aaKnown RBP18.69■□□□□ 0.58
SF3A1-202ENST00000411423 POT1Q9NUX5 634 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 KLHL3Q9UH77 587 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 CRLS1Q9UJA2 301 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 ZNF148Q9UQR1 794 aa18.69■□□□□ 0.58
SF3A1-202ENST00000411423 CFAP20Q9Y6A4 193 aaKnown RBP18.69■□□□□ 0.58
SF3A1-202ENST00000411423 ATMQ13315 3056 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 MROH6A6NGR9 719 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 OR51F1A6NGY5 319 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 EFCAB7A8K855 629 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 H7C0S8 307 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 RPL22P35268 128 aaKnown RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 LEPRP48357 1165 aaKnown RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 PPM1FP49593 454 aaPredicted RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 PDE1BQ01064 536 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 ZNF658BQ4V348 819 aaPredicted RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 BCL7AQ4VC05 210 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 ARHGAP40Q5TG30 622 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 METRNLQ641Q3 311 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 DTX1Q86Y01 620 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 TRIM48Q8IWZ4 208 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 AGBL5Q8NDL9 886 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 SPDYE1Q8NFV5 336 aaPredicted RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 ART4Q93070 314 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 CDKN2AIPNLQ96HQ2 116 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 ALS2CR12Q96Q35 445 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 C19orf43Q9BQ61 176 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 FRMD8P1Q9BZ68 369 aaPredicted RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 ZMYND15Q9H091 742 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 GRPEL1Q9HAV7 217 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 FAM8A1Q9UBU6 413 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 B3GALT1Q9Y5Z6 326 aa18.68■□□□□ 0.58
SF3A1-202ENST00000411423 DNMT3AQ9Y6K1 912 aaPredicted RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 MN1Q10571 1320 aaPredicted RBP18.68■□□□□ 0.58
SF3A1-202ENST00000411423 SDK2Q58EX2 2172 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 IGLV3-16A0A075B6K0 115 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 UBXN7O94888 489 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 SUN1O94901 812 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 FGGP02679 453 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 C9P02748 559 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 WT1P19544 449 aaPredicted RBP18.67■□□□□ 0.58
SF3A1-202ENST00000411423 ITGALP20701 1170 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 HADHAP40939 763 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 KCNJ1P48048 391 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 TMPRSS3P57727 454 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 PPP1CAP62136 330 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 SEMA5AQ13591 1074 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 CCNG2Q16589 344 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 LONRF2Q1L5Z9 754 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 BROXQ5VW32 411 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 GPR155Q7Z3F1 870 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 SERPINA9Q86WD7 417 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 OR2L2Q8NH16 312 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 STYXQ8WUJ0 223 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 CXorf40BQ96DE9 158 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 LINC00615Q96LM1 132 aaPredicted RBP18.67■□□□□ 0.58
SF3A1-202ENST00000411423 ZNF778Q96MU6 729 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 INSM2Q96T92 566 aaPredicted RBP18.67■□□□□ 0.58
SF3A1-202ENST00000411423 WWP1Q9H0M0 922 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 APMAPQ9HDC9 416 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 RAB6BQ9NRW1 208 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 SLC2A6Q9UGQ3 507 aa18.67■□□□□ 0.58
SF3A1-202ENST00000411423 CACNA1GO43497 2377 aa18.66■□□□□ 0.58
SF3A1-202ENST00000411423 MGAT4DA6NG13 374 aa18.66■□□□□ 0.58
SF3A1-202ENST00000411423 PSMD3O43242 534 aa18.66■□□□□ 0.58
SF3A1-202ENST00000411423 KIF1CO43896 1103 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms