RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-205	ENST00000409952	MAGEA4	P43358	317 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	CXCR3	P49682	368 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	UCP2	P55851	309 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	IFI44L	Q53G44	452 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	TEX35	Q5T0J7	233 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	TXNRD3NB	Q6F5E7	133 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	SLC25A24	Q6NUK1	477 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	CCDC73	Q6ZRK6	1079 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	PLEKHM3	Q6ZWE6	761 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	MARK2	Q7KZI7	788 aa	Known RBP	4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	ZNF627	Q7L945	461 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	IGFN1	Q86VF2	1251 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	ZNF410	Q86VK4	478 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	CCDC83	Q8IWF9	413 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	GALNT16	Q8N428	558 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	TERB1	Q8NA31	727 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	MCPH1	Q8NEM0	835 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	EXD1	Q8NHP7	514 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	BBS10	Q8TAM1	723 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	CAGE1	Q8TC20	777 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	RAD54L	Q92698	747 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	HAS1	Q92839	578 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	TMEM186	Q96B77	213 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	MRPL38	Q96DV4	380 aa	Known RBP	4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	MYEOV	Q96EZ4	313 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	VCPIP1	Q96JH7	1222 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	KLHL5	Q96PQ7	755 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	ISCU	Q9H1K1	167 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	P2RY12	Q9H244	342 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	FN3K	Q9H479	309 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	MAGIX	Q9H6Y5	334 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	ZNF304	Q9HCX3	659 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	DDX4	Q9NQI0	724 aa	Known RBP	4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	PNPLA3	Q9NST1	481 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	DBNL	Q9UJU6	430 aa	Known RBP	4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	NPHP3	Q7Z494	1330 aa		4.85	□□□□□ -1.63
LSM5-205	ENST00000409952	C5orf51	A6NDU8	294 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	TMEM8B	A6NDV4	472 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	TMEM202	A6NGA9	273 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	GPR89A	B7ZAQ6	455 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952		O00370	1275 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PTGES	O14684	152 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PEX1	O43933	1283 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	CRCP	O75575	148 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PGLS	O95336	258 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	NFATC1	O95644	943 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	MT-ATP6	P00846	226 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PDGFB	P01127	241 aa	Predicted RBP	4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	TGFA	P01135	160 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	GPR89B	P0CG08	455 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	TPBGL	P0DKB5	382 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	TCF4	P15884	667 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	CYP11B2	P19099	503 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	ACAT1	P24752	427 aa	Known RBP	4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PPP2R2B	Q00005	443 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	SGCG	Q13326	291 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	DPYS	Q14117	519 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	FHL2	Q14192	279 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	ARHGEF6	Q15052	776 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PFKFB3	Q16875	520 aa	Predicted RBP	4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	C2orf68	Q2NKX9	166 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	MAJIN	Q3KP22	176 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	IQCC	Q4KMZ1	466 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	AARS2	Q5JTZ9	985 aa	Known RBP	4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PCID2	Q5JVF3	399 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	KIAA1755	Q5JYT7	1200 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PRAMEF19	Q5SWL8	479 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	NOTUM	Q6P988	496 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	BRAT1	Q6PJG6	821 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	C1orf186	Q6ZWK4	172 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	CACNA2D4	Q7Z3S7	1137 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	TFAP2D	Q7Z6R9	452 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	DENND6A	Q8IWF6	608 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	BATF2	Q8N1L9	274 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PARP16	Q8N5Y8	322 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	AGBL3	Q8NEM8	1001 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	OR52E1	Q8NGJ3	308 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	B4GALNT2	Q8NHY0	566 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	ADAMTS14	Q8WXS8	1223 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	NSMAF	Q92636	917 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	KAT2B	Q92831	832 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	SAMD8	Q96LT4	415 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	SPATA13	Q96N96	652 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	NAP1L3	Q99457	506 aa	Predicted RBP	4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	SEPHS2	Q99611	448 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	OLFM1	Q99784	485 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	PRRX2	Q99811	253 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	MRI	Q9BWK5	157 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	CDT1	Q9H211	546 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	SRD5A3	Q9H8P0	318 aa		4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	TES	Q9UGI8	421 aa	Known RBP	4.84	□□□□□ -1.63
LSM5-205	ENST00000409952	DHX29	Q7Z478	1369 aa	Known RBP	4.83	□□□□□ -1.64
LSM5-205	ENST00000409952	C17orf102	A2RUQ5	167 aa		4.83	□□□□□ -1.64
LSM5-205	ENST00000409952	UNC119B	A6NIH7	251 aa		4.83	□□□□□ -1.64
LSM5-205	ENST00000409952	UBXN8	O00124	270 aa		4.83	□□□□□ -1.64
LSM5-205	ENST00000409952	ANGPT2	O15123	496 aa		4.83	□□□□□ -1.64
LSM5-205	ENST00000409952	AKR7A3	O95154	331 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms