RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 BTN2A2Q8WVV5 523 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 DENND2DQ9H6A0 471 aaPredicted RBP16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 NEMP2A6NFY4 417 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 METTL18O95568 372 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 MPP1Q00013 466 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 CPNE8Q86YQ8 564 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 GJD3Q8N144 294 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 OR52L1Q8NGH7 329 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 METTL21AQ8WXB1 218 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 BADQ92934 168 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 RIT1Q92963 219 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC38A3Q99624 504 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 GRIP2Q9C0E4 1043 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 PIF1Q9H611 641 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 USE1Q9NZ43 259 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 ADAM30Q9UKF2 790 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 BTRCQ9Y297 605 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC31A1O15431 190 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 TRBC1P01850 177 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 NTRK1P04629 796 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC6A2P23975 617 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 KRR1Q13601 381 aaKnown RBP16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 HEPACAMQ14CZ8 416 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 ARSIQ5FYB1 569 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 OTUD3Q5T2D3 398 aaPredicted RBP16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 FAM92BQ6ZTR7 304 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 LRRTM4Q86VH4 590 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 KIAA2013Q8IYS2 634 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 GSTCDQ8NEC7 633 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 TMEM174Q8WUU8 243 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 PNPOQ9NVS9 261 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 DNAJB4Q9UDY4 337 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 PACSIN3Q9UKS6 424 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 RUVBL1Q9Y265 456 aaKnown RBP16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 TELO2Q9Y4R8 837 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 CCNHP51946 323 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 GSCP56915 257 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 IL5RAQ01344 420 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 GTF2H2Q13888 395 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 GTF2H2CQ6P1K8 395 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 CLVS1Q8IUQ0 354 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 RBM15BQ8NDT2 890 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 UTP15Q8TED0 518 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 C12orf65Q9H3J6 166 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 ZDHHC7Q9NXF8 308 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 C3orf18Q9UK00 162 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 SMIM31A0A1B0GVY4 71 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 CCDC162PA2VCL2 907 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 OR2AG2A6NM03 316 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 HAS3O00219 553 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 FAM155BO75949 473 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 GSRP00390 522 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 RHOP08100 348 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 TAS2R39P59534 338 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 MRPS15P82914 257 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 ROR2Q01974 943 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 NRF1Q16656 503 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 RASSF5Q8WWW0 418 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 Q96MT0 163 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 ARHGEF3Q9NR81 526 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 ELOVL2Q9NXB9 296 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 CDC14AQ9UNH5 594 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 ARHGEF9O43307 516 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 SH3BGRLO75368 114 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 LINC00032P0C843 101 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 SEC13P55735 322 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 XIAPP98170 497 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 PLEKHG6Q3KR16 790 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 CDC73Q6P1J9 531 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 B3GNT6Q6ZMB0 384 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 ARHGAP22Q7Z5H3 698 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 CMTM8Q8IZV2 173 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 DEPDC4Q8N2C3 294 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 GSDMCQ9BYG8 508 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 GPR62Q9BZJ7 368 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 DPEP2Q9H4A9 486 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 H3BN98 237 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 FBXW8Q8N3Y1 598 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 CPSF7Q8N684 471 aaKnown RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 DENND1AQ8TEH3 1009 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 SRMSQ9H3Y6 488 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 C8orf33Q9H7E9 229 aaPredicted RBP16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 HSFX1Q9UBD0 423 aa16.59■□□□□ 0.25
PCDHA13-202ENST00000409494 ITPKAP23677 461 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 EPHA3P29320 983 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 RPL5P46777 297 aaKnown RBP16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 STX4Q12846 297 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 CHIT1Q13231 466 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 VPS26BQ4G0F5 336 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 PITRM1Q5JRX3 1037 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 GALNT18Q6P9A2 607 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 TCEAL8Q8IYN2 117 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 ZNF317Q96PQ6 595 aaPredicted RBP16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 TBCDQ9BTW9 1192 aa16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 SAMD4AQ9UPU9 718 aaKnown RBP16.58■□□□□ 0.25
PCDHA13-202ENST00000409494 FOXN2P32314 431 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 DGKEP52429 567 aa16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 TSNQ15631 228 aaKnown RBP16.58■□□□□ 0.24
PCDHA13-202ENST00000409494 LY6G5CQ5SRR4 150 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms