RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 AADATQ8N5Z0 425 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 STAG3L4Q8TBR4 150 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 GLYATL1Q969I3 302 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 KIAA1191Q96A73 305 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 TRIM55Q9BYV6 548 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 ALG9Q9H6U8 611 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 LATS2Q9NRM7 1088 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 KLHL14Q9P2G3 628 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 PCDHGA2Q9Y5H1 932 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 SYCE1LA8MT33 242 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 ZBTB14O43829 449 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 MMP20O60882 483 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 KERAO60938 352 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 ADAM23O75077 832 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 SNUPNO95149 360 aaKnown RBP20.72■□□□□ 0.91
TPM1-208ENST00000404484 SLC25A14O95258 325 aaPredicted RBP20.72■□□□□ 0.91
TPM1-208ENST00000404484 ATP1B2P14415 290 aaPredicted RBP20.72■□□□□ 0.91
TPM1-208ENST00000404484 GM2AP17900 193 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 HOXA6P31267 233 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 SLC1A6P48664 564 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 TTC31Q49AM3 519 aaPredicted RBP20.72■□□□□ 0.91
TPM1-208ENST00000404484 CLDN19Q8N6F1 224 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 OR6Y1Q8NGX8 325 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 GIMAP7Q8NHV1 300 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 LINGO1Q96FE5 620 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 UNKQ9C0B0 810 aaKnown RBP20.72■□□□□ 0.91
TPM1-208ENST00000404484 ZCCHC2Q9C0B9 1178 aaKnown RBP20.72■□□□□ 0.91
TPM1-208ENST00000404484 TMPRSS11EQ9UL52 423 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 TMCO1Q9UM00 188 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 ARL2BPQ9Y2Y0 163 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 PRSS21Q9Y6M0 314 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 EP300Q09472 2414 aaPredicted RBP20.71■□□□□ 0.91
TPM1-208ENST00000404484 ERICH4A6NGS2 130 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 IQCF5A8MTL0 148 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 FADS2P1A8MWK0 482 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 EIF3FO00303 357 aaPredicted RBP20.71■□□□□ 0.91
TPM1-208ENST00000404484 DLX3O60479 287 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 TRIM16O95361 564 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 TPBGLP0DKB5 382 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 DGKAP23743 735 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 SERPINB5P36952 375 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 PXNP49023 591 aaPredicted RBP20.71■□□□□ 0.91
TPM1-208ENST00000404484 FNTBP49356 437 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 ABCE1P61221 599 aaKnown RBP20.71■□□□□ 0.91
TPM1-208ENST00000404484 B4GALNT1Q00973 533 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 CGB2Q6NT52 195 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 KIAA1211LQ6NV74 962 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 ZC3H14Q6PJT7 736 aaKnown RBP20.71■□□□□ 0.91
TPM1-208ENST00000404484 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.71■□□□□ 0.91
TPM1-208ENST00000404484 ZBTB2Q8N680 514 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 HHIPQ96QV1 700 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 GALPQ9UBC7 116 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 MMP17Q9ULZ9 603 aa20.71■□□□□ 0.91
TPM1-208ENST00000404484 FANCMQ8IYD8 2048 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 A0A1W2PQF6 199 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 KPNA5O15131 536 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 LILRB5O75023 590 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 RNASEH2AO75792 299 aaKnown RBP20.7■□□□□ 0.9
TPM1-208ENST00000404484 IPO13O94829 963 aaKnown RBP20.7■□□□□ 0.9
TPM1-208ENST00000404484 CBSLP0DN79 551 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 CBSP35520 551 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 NFKB2Q00653 900 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 PIWIL4Q7Z3Z4 852 aaKnown RBP20.7■□□□□ 0.9
TPM1-208ENST00000404484 TMPRSS6Q8IU80 811 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 CPNE9Q8IYJ1 553 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 GANCQ8TET4 914 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 PTERQ96BW5 349 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 ERLEC1Q96DZ1 483 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 SGF29Q96ES7 293 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 SLC30A3Q99726 388 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 GATA5Q9BWX5 397 aaPredicted RBP20.7■□□□□ 0.9
TPM1-208ENST00000404484 RNF112Q9ULX5 631 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 COQ6Q9Y2Z9 468 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 SDK1Q7Z5N4 2213 aa20.7■□□□□ 0.9
TPM1-208ENST00000404484 A0A1W2PP55 124 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 TM7SF2O76062 418 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 TSPAN12O95859 305 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 FTH1P02794 183 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 C7P10643 843 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 GPR1P46091 355 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 TMEM92Q6UXU6 159 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 RAB44Q7Z6P3 723 aaPredicted RBP20.69■□□□□ 0.9
TPM1-208ENST00000404484 CACUL1Q86Y37 369 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 MYO1HQ8N1T3 1032 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 CAMKK1Q8N5S9 505 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 EEF1AKMT1Q8WVE0 214 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 FAM131CQ96AQ9 280 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 CCDC97Q96F63 343 aaPredicted RBP20.69■□□□□ 0.9
TPM1-208ENST00000404484 SIKE1Q9BRV8 207 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 MKRN2Q9H000 416 aaKnown RBP20.69■□□□□ 0.9
TPM1-208ENST00000404484 FBXL12Q9NXK8 326 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 NCKIPSDQ9NZQ3 722 aa20.69■□□□□ 0.9
TPM1-208ENST00000404484 BTN3A1O00481 513 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 NPHS1O60500 1241 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 PCDH8O95206 1070 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 HSPA4LO95757 839 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 ENO3P13929 434 aaPredicted RBP20.68■□□□□ 0.9
TPM1-208ENST00000404484 TAS2R38P59533 333 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 CFAP157Q5JU67 520 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 CES4AQ5XG92 561 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms