RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LINGO1Q96FE5 620 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 POPDC3Q9HBV1 291 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 SYTL2Q9HCH5 934 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 PCYT1BQ9Y5K3 369 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-204ENST00000397443 MAP3K13O43283 966 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 AP2A2O94973 939 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 WISP3O95389 354 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-204ENST00000397443 CBX1P83916 185 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 HSPA14Q0VDF9 509 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 USP39Q53GS9 565 aaKnown RBP20.86■□□□□ 0.93
CPNE1-204ENST00000397443 INPP5DQ92835 1189 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 SPACA7Q96KW9 195 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 UBXN10Q96LJ8 280 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 NMRAL1Q9HBL8 299 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-204ENST00000397443 TK2O00142 265 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 SCAMP1O15126 338 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 LAMTOR5O43504 91 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 ZBTB14O43829 449 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 MYCLP1P12525 358 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-204ENST00000397443 FNTBP49356 437 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 PRLHRP49683 370 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 CCR5P51681 352 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 IL2P60568 153 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 AGAP9Q5VTM2 703 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 BMFQ96LC9 184 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 GPR78Q96P69 363 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 SLCO1B1Q9Y6L6 691 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 KNL1Q8NG31 2342 aa20.86■□□□□ 0.93
CPNE1-204ENST00000397443 EML5Q05BV3 1969 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 CACNB4O00305 520 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-204ENST00000397443 VEGFDO43915 354 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 PLIN3O60664 434 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 MAGEC1O60732 1142 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 FTH1P02794 183 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 GSTA1P08263 222 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 COL6A2P12110 1019 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 BCKDHBP21953 392 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 INSCQ1MX18 579 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 ACSBG2Q5FVE4 666 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 LRRC8EQ6NSJ5 796 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 GCNT7Q6ZNI0 430 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 PIWIL4Q7Z3Z4 852 aaKnown RBP20.85■□□□□ 0.93
CPNE1-204ENST00000397443 FSTL5Q8N475 847 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-204ENST00000397443 LILRA3Q8N6C8 439 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-204ENST00000397443 TMEM105Q8N8V8 129 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 DENND6BQ8NEG7 585 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 MECRQ9BV79 373 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 TSSK1BQ9BXA7 367 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 ALG9Q9H6U8 611 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 MRPL40Q9NQ50 206 aaKnown RBP20.85■□□□□ 0.93
CPNE1-204ENST00000397443 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-204ENST00000397443 XPR1Q9UBH6 696 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 ZNHIT2Q9UHR6 403 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 ANKRD12Q6UB98 2062 aa20.85■□□□□ 0.93
CPNE1-204ENST00000397443 TFEBP19484 476 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 CD9P21926 228 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 KLC3Q6P597 504 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 ZNF547Q8IVP9 402 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 NKAPQ8N5F7 415 aaKnown RBP20.84■□□□□ 0.93
CPNE1-204ENST00000397443 SKA2Q8WVK7 121 aaPredicted RBP20.84■□□□□ 0.93
CPNE1-204ENST00000397443 EXT2Q93063 718 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 TM7SF3Q9NS93 570 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 ADAM21Q9UKJ8 722 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 IKZF3Q9UKT9 509 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 QSOX1O00391 747 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 TSPAN12O95859 305 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 PROCP04070 461 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 CD1DP15813 335 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 MAOBP27338 520 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 AOAHP28039 575 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 TEAD1P28347 426 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 MDH1P40925 334 aaKnown RBP20.84■□□□□ 0.93
CPNE1-204ENST00000397443 ETV4P43268 484 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 CSTF1Q05048 431 aaKnown RBP20.84■□□□□ 0.93
CPNE1-204ENST00000397443 TSNAXIP1Q2TAA8 658 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 KYAT3Q6YP21 454 aaKnown RBP20.84■□□□□ 0.93
CPNE1-204ENST00000397443 TMEFF1Q8IYR6 380 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 CCM2Q9BSQ5 444 aa20.84■□□□□ 0.93
CPNE1-204ENST00000397443 EIF2B4Q9UI10 523 aaKnown RBP20.84■□□□□ 0.93
CPNE1-204ENST00000397443 NPEPPSL1A6NEC2 478 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 PRAMEF26H0Y7S4 382 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 BTN3A1O00481 513 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 PREPP48147 710 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 SLC18A1P54219 525 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 TCEA2Q15560 299 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 TTLL9Q3SXZ7 439 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 SYTL3Q4VX76 610 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 TPRG1LQ5T0D9 272 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 ARMCX6Q7L4S7 300 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 CCDC91Q7Z6B0 441 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 VRK3Q8IV63 474 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 TMEM145Q8NBT3 493 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 PTERQ96BW5 349 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 MIR1-1HGQ9H1L0 117 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 AASDHPPTQ9NRN7 309 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 DNAJC16Q9Y2G8 782 aa20.83■□□□□ 0.93
CPNE1-204ENST00000397443 A0A1W2PPC4 97 aa20.82■□□□□ 0.92
CPNE1-204ENST00000397443 MEI4A8MW99 385 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms