RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ZSWIM3Q96MP5 696 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 KLHL32Q96NJ5 620 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 SPATS2LQ9NUQ6 558 aaKnown RBP14.75□□□□□ -0.05
CBX3-202ENST00000396386 GIMAP2Q9UG22 337 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 DPP7Q9UHL4 492 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 PACSIN3Q9UKS6 424 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 SARDHQ9UL12 918 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 ASB1Q9Y576 335 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 TIMM22Q9Y584 194 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 PIKFYVEQ9Y2I7 2098 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 TRIM38O00635 465 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 NRP2O60462 931 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 RB1P06400 928 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 CYP2A6P11509 494 aaPredicted RBP14.74□□□□□ -0.05
CBX3-202ENST00000396386 HGFP14210 728 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 XRCC1P18887 633 aaPredicted RBP14.74□□□□□ -0.05
CBX3-202ENST00000396386 PRDX3P30048 256 aaKnown RBP14.74□□□□□ -0.05
CBX3-202ENST00000396386 PTSQ03393 145 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 CEACAM7Q14002 265 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 CAMK1Q14012 370 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 LRP8Q14114 963 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ARHGEF7Q14155 803 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 FLOT2Q14254 428 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 GSTA3Q16772 222 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 XKR7Q5GH72 579 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 GPRC6AQ5T6X5 926 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 OGFOD2Q6N063 350 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 PAOXQ6QHF9 649 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 HACD2Q6Y1H2 254 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 SPATA19Q7Z5L4 167 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 SNX31Q8N9S9 440 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 OR9I1Q8NGQ6 314 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ESAMQ96AP7 390 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 COPS8Q99627 209 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 HEPHQ9BQS7 1158 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 MRPL40Q9NQ50 206 aaKnown RBP14.74□□□□□ -0.05
CBX3-202ENST00000396386 KCTD5Q9NXV2 234 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 PKD2L2Q9NZM6 624 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ZNF225Q9UK10 706 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 PCDHGA7Q9Y5G6 932 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ATG2AQ2TAZ0 1938 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ANKRD12Q6UB98 2062 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 NR5A2O00482 541 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 OR4F21O95013 312 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 PRR35P0CG20 571 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 CBSLP0DN79 551 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 IDO1P14902 403 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ZNF30P17039 623 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 VIPR1P32241 457 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 CBSP35520 551 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 NNMTP40261 264 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 SPINT3P49223 89 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 LRRC73Q5JTD7 316 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 GOLGA7Q7Z5G4 137 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 NAT16Q8N8M0 369 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ZNF707Q96C28 371 aaPredicted RBP14.74□□□□□ -0.05
CBX3-202ENST00000396386 CCT7Q99832 543 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 APOL5Q9BWW9 433 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 LATS2Q9NRM7 1088 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 RIC8BQ9NVN3 520 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ADA2Q9NZK5 511 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 KLHL42Q9P2K6 505 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 SLC8A2Q9UPR5 921 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 MRPS23Q9Y3D9 190 aaKnown RBP14.74□□□□□ -0.05
CBX3-202ENST00000396386 HCFC2Q9Y5Z7 792 aa14.74□□□□□ -0.05
CBX3-202ENST00000396386 ARHGEF15O94989 841 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 MATN4O95460 622 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 VCLP18206 1134 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 NFKBIAP25963 317 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 ARL1P40616 181 aaPredicted RBP14.73□□□□□ -0.05
CBX3-202ENST00000396386 PSMD8P48556 350 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 GTF2H2Q13888 395 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 ATP13A5Q4VNC0 1218 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 TMEM215Q68D42 235 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 TRIM68Q6AZZ1 485 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 GTF2H2CQ6P1K8 395 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 KBTBD6Q86V97 674 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 FUNDC1Q8IVP5 155 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 ADGRG2Q8IZP9 1017 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 FRS2Q8WU20 508 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 CYB5D2Q8WUJ1 264 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 UBTD2Q8WUN7 234 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 N4BP2L2Q92802 583 aaPredicted RBP14.73□□□□□ -0.05
CBX3-202ENST00000396386 MRGPRX3Q96LB0 322 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 SDR39U1Q9NRG7 319 aaPredicted RBP14.73□□□□□ -0.05
CBX3-202ENST00000396386 ADAMTS6Q9UKP5 1117 aa14.73□□□□□ -0.05
CBX3-202ENST00000396386 IGLV3-16A0A075B6K0 115 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 TSPAN11A1L157 253 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 CYP17A1P05093 508 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 OR56A5P0C7T3 313 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 MRPL19P49406 292 aaKnown RBP14.72□□□□□ -0.05
CBX3-202ENST00000396386 RPS6KA2Q15349 733 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 PDE12Q6L8Q7 609 aaKnown RBP14.72□□□□□ -0.05
CBX3-202ENST00000396386 RFLNAQ6ZTI6 216 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 CELF5Q8N6W0 485 aaKnown RBP14.72□□□□□ -0.05
CBX3-202ENST00000396386 CDYL2Q8N8U2 506 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 PCYOX1LQ8NBM8 494 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 OR52B6Q8NGF0 335 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 WFIKKN2Q8TEU8 576 aa14.72□□□□□ -0.05
CBX3-202ENST00000396386 ROPN1LQ96C74 230 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms