RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 TMPRSS9Q7Z410 1059 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 B3GNT8Q7Z7M8 397 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 PIANPQ8IYJ0 282 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 Q8N9G6 341 aaPredicted RBP13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 OR2L2Q8NH16 312 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 WDR36Q8NI36 951 aaKnown RBP13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 ATXN7L3BQ96GX2 97 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 CRELD1Q96HD1 420 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 COPS8Q99627 209 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 DPYSL5Q9BPU6 564 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 POLR1BQ9H9Y6 1135 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 ZNF624Q9P2J8 865 aaPredicted RBP13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 CPNE7Q9UBL6 633 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 DNAJC16Q9Y2G8 782 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 PCDHGA8Q9Y5G5 932 aa13.12□□□□□ -0.31
HLA-DMA-202ENST00000395303 SDK2Q58EX2 2172 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 CCDC187A0A096LP49 1063 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 C17orf113A0A1B0GUU1 675 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 TCRBV7S3A2A0A539 114 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 MGAT4DA6NG13 374 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 LILRA5A6NI73 299 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 CFAP99D6REC4 459 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 SNX2O60749 519 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 RALBP11234 206 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 SLC19A1P41440 591 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 INHBCP55103 352 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 CFHR1Q03591 330 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 ITIH4Q14624 930 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 ZNF658BQ4V348 819 aaPredicted RBP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 ZRANB3Q5FWF4 1079 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 PCID2Q5JVF3 399 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 METRNLQ641Q3 311 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 PACS1Q6VY07 963 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 ZNF574Q6ZN55 896 aaPredicted RBP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 SERPINA9Q86WD7 417 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 LSMEM2Q8N112 164 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 GRK7Q8WTQ7 553 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 SLCO2A1Q92959 643 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 ZNF778Q96MU6 729 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 IL22Q9GZX6 179 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 EPB41L1Q9H4G0 881 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 FAM96AQ9H5X1 160 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 STN1Q9H668 368 aaKnown RBP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 SLC2A6Q9UGQ3 507 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 PCYOX1Q9UHG3 505 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 ATXN7L1Q9ULK2 861 aaPredicted RBP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 SATB2Q9UPW6 733 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 PCM1Q15154 2024 aa13.11□□□□□ -0.31
HLA-DMA-202ENST00000395303 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 CCDC162PA2VCL2 907 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 PDZK1P1A8MUH7 402 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 FANCGO15287 622 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 BRINP1O60477 761 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 AP2A2O94973 939 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 ALDH4A1P30038 563 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 CSF2RBP32927 897 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 LIMK2P53671 638 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 GNG11P61952 73 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 GABREP78334 506 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 GPS1Q13098 491 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 BIRC2Q13490 618 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 NFE2L1Q14494 772 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 CLCA4Q14CN2 919 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 DBN1Q16643 649 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 FNBP1LQ5T0N5 605 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 AFTPHQ6ULP2 937 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 FAM83HQ6ZRV2 1179 aaPredicted RBP13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 PIM3Q86V86 326 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 RBM12BQ8IXT5 1001 aaKnown RBP13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 MCUQ8NE86 351 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 PPHLN1Q8NEY8 458 aaKnown RBP13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 OR4D9Q8NGE8 314 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 SNIP1Q8TAD8 396 aaKnown RBP13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 CPT1BQ92523 772 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 HDAC10Q969S8 669 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 TMEM159Q96B96 161 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 DCUN1D1Q96GG9 259 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 ZNF578Q96N58 590 aaPredicted RBP13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 KIFC1Q9BW19 673 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 ASCL3Q9NQ33 180 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 TREX1Q9NSU2 369 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 POT1Q9NUX5 634 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 KCNK4Q9NYG8 393 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 BFARQ9NZS9 450 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 AK5Q9Y6K8 562 aa13.1□□□□□ -0.31
HLA-DMA-202ENST00000395303 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
HLA-DMA-202ENST00000395303 OR51F1A6NGY5 319 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms