RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 RGS8P57771 180 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ZMIZ2Q8NF64 920 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 SH3RF2Q8TEC5 729 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PCBD2Q9H0N5 130 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 SLCO1B3Q9NPD5 702 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PNPLA3Q9NST1 481 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PLLPQ9Y342 182 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 IRAK3Q9Y616 596 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PGRMC2O15173 223 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CD48P09326 243 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 DAOAP59103 153 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CLCQ05315 142 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PCDH1Q08174 1060 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CHIT1Q13231 466 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 SULT1C3Q6IMI6 304 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ZYG11AQ6WRX3 759 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 TRABD2AQ86V40 505 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 HMGB4Q8WW32 186 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 NUS1Q96E22 293 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 RNF31Q96EP0 1072 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CCNB1IP1Q9NPC3 277 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 EFR3BQ9Y2G0 817 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PRODHO43272 600 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 MTRF1O75570 445 aaKnown RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 UBXN7O94888 489 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 C8GP07360 202 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 NMBRP28336 390 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 MTX3Q5HYI7 312 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 IL23RQ5VWK5 629 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 OLFML2AQ68BL7 652 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PSMA8Q8TAA3 256 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 WFIKKN2Q8TEU8 576 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 AGAP11Q8TF27 550 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PIGKQ92643 395 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 MRPS30Q9NP92 439 aaKnown RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 POLR3BQ9NW08 1133 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PDP1Q9P0J1 537 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 DCLK1O15075 740 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 FOLH1Q04609 750 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ZNF846Q147U1 533 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 TAF1AQ15573 450 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 SNAPC1Q16533 368 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 C2orf27AQ580R0 203 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 TSTD2Q5T7W7 516 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CLEC6AQ6EIG7 209 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 TMPRSS11AQ6ZMR5 421 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 POC5Q8NA72 575 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 COX4I2Q96KJ9 171 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 B3GALT6Q96L58 329 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ZBTB11O95625 1053 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 MT-CYBP00156 380 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 FABP3P05413 133 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 DRD4P21917 467 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 GDI1P31150 447 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 DHPSP49366 369 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 CCT3P49368 545 aaKnown RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PRR5P85299 388 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 FSTL1Q12841 308 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 PPM1JQ5JR12 505 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 SLC30A6Q6NXT4 461 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 TBC1D21Q8IYX1 336 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 LIX1Q8N485 282 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 LPIN3Q9BQK8 851 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 C1QTNF1Q9BXJ1 281 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 MBD2Q9UBB5 411 aa10.28□□□□□ -0.76
COL4A6-203ENST00000394872 R3HDM2Q9Y2K5 976 aaKnown RBP10.28□□□□□ -0.76
COL4A6-203ENST00000394872 ASLP04424 464 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 UROSP10746 265 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 KCNJ2P63252 427 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 RGS21Q2M5E4 152 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 CARD16Q5EG05 197 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 GPR107Q5VW38 600 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 GLYATQ6IB77 296 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 ECHDC2Q86YB7 292 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 DCBLD1Q8N8Z6 715 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 FAM81AQ8TBF8 368 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 FAM124BQ9H5Z6 455 aaPredicted RBP10.27□□□□□ -0.76
COL4A6-203ENST00000394872 KCND1Q9NSA2 647 aa10.27□□□□□ -0.76
COL4A6-203ENST00000394872 PRR5-ARHGAP8B1AHC4 643 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ARVCFO00192 962 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 NRP1O14786 923 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 CASKO14936 926 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 PRKAR1AP10644 381 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 HOXB6P17509 224 aaKnown RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 CD247P20963 164 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 PDX1P52945 283 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 PNLIPRP1P54315 467 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ARHGAP8P85298 464 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 TRAP1Q12931 704 aaKnown RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ESRP1Q6NXG1 681 aaKnown RBP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 SPPL2CQ8IUH8 684 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 AZIN2Q96A70 460 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 OR2AG1Q9H205 316 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ENTPD5O75356 428 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 TIPRLO75663 272 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 DDX6P26196 483 aaKnown RBP eCLIP10.27□□□□□ -0.77
COL4A6-203ENST00000394872 ARF5P84085 180 aa10.27□□□□□ -0.77
COL4A6-203ENST00000394872 MYBPC3Q14896 1274 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms