RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 ARMC3Q5W041 872 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 TTC27Q6P3X3 843 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 CCDC137Q6PK04 289 aaKnown RBP8.41□□□□□ -1.06
APLF-202ENST00000394342 IGF2-ASQ6U949 168 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 ABRAXAS1Q6UWZ7 409 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 PROSER1Q86XN7 944 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 PPHLN1Q8NEY8 458 aaKnown RBP8.41□□□□□ -1.06
APLF-202ENST00000394342 MDM1Q8TC05 714 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 LIN37Q96GY3 246 aaPredicted RBP8.41□□□□□ -1.06
APLF-202ENST00000394342 LINC00615Q96LM1 132 aaPredicted RBP8.41□□□□□ -1.06
APLF-202ENST00000394342 SLC38A3Q99624 504 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 COPS8Q99627 209 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 NAPGQ99747 312 aaPredicted RBP8.41□□□□□ -1.06
APLF-202ENST00000394342 DPYSL5Q9BPU6 564 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 AP1M1Q9BXS5 423 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 STRADBQ9C0K7 418 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 EPB41L1Q9H4G0 881 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 FAM96AQ9H5X1 160 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 UCK1Q9HA47 277 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 PRDM8Q9NQV8 689 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 KCND1Q9NSA2 647 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 ZDHHC3Q9NYG2 299 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 CPNE7Q9UBL6 633 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 DNAJC16Q9Y2G8 782 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 TCAF1Q9Y4C2 921 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 AK5Q9Y6K8 562 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 FER1L5A0AVI2 2057 aa8.41□□□□□ -1.06
APLF-202ENST00000394342 TRBV23OR9-2A0A075B6M9 112 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 IGHV1OR21-1A0A087WYE8 117 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 CCDC187A0A096LP49 1063 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 CCDC162PA2VCL2 907 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 CTAGE9A4FU28 777 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 MGAT4DA6NG13 374 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 LILRA5A6NI73 299 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 OR2AG2A6NM03 316 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 PDZK1P1A8MUH7 402 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ZNF185O15231 689 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 CASC3O15234 703 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 B4GAT1O43505 415 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 BRINP1O60477 761 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 POP7O75817 140 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 DXOO77932 396 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 GSTM1P09488 218 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ATP1B2P14415 290 aaPredicted RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 ALDH4A1P30038 563 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 NPY2RP49146 381 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 PRLHRP49683 370 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ARSDP51689 593 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 EPHA4P54764 986 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 INHBCP55103 352 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 GABREP78334 506 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 SARNPP82979 210 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 GSTM4Q03013 218 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ACVR1Q04771 509 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ZFP36L1Q07352 338 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 GPS1Q13098 491 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 EIF3IQ13347 325 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 ITIH4Q14624 930 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 KCNJ11Q14654 390 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 MAP9Q49MG5 647 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 PCID2Q5JVF3 399 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 FNBP1LQ5T0N5 605 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 LYPLAL1Q5VWZ2 237 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 PAPD7Q5XG87 772 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 METRNLQ641Q3 311 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 LRRC8BQ6P9F7 803 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 AFTPHQ6ULP2 937 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 DET1Q7L5Y6 550 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 PIM3Q86V86 326 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 SERPINA9Q86WD7 417 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 TRIM48Q8IWZ4 208 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 RBM12BQ8IXT5 1001 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 LSMEM2Q8N112 164 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 OR13J1Q8NGT2 312 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 OR2L2Q8NH16 312 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 WDR36Q8NI36 951 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.4□□□□□ -1.06
APLF-202ENST00000394342 TMEM159Q96B96 161 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 SGF29Q96ES7 293 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ATXN7L3BQ96GX2 97 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 SGSM3Q96HU1 749 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 IL22Q9GZX6 179 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 VPS37BQ9H9H4 285 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 POLR1BQ9H9Y6 1135 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 MRM3Q9HC36 420 aaKnown RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 KCNK4Q9NYG8 393 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 SMARCAL1Q9NZC9 954 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 BFARQ9NZS9 450 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 ACSL5Q9ULC5 683 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ZMIZ1Q9ULJ6 1067 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 ATXN7L1Q9ULK2 861 aaPredicted RBP8.4□□□□□ -1.06
APLF-202ENST00000394342 SATB2Q9UPW6 733 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 NEU2Q9Y3R4 380 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 PCDHGA8Q9Y5G5 932 aa8.4□□□□□ -1.06
APLF-202ENST00000394342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.4□□□□□ -1.06
APLF-202ENST00000394342 CACNA1GO43497 2377 aa8.39□□□□□ -1.07
APLF-202ENST00000394342 BSNQ9UPA5 3926 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms