RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SLC25A18Q9H1K4 315 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 DENND2DQ9H6A0 471 aaPredicted RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 EPB41L5Q9HCM4 733 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SIX2Q9NPC8 291 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 EHD2Q9NZN4 543 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 RCC2Q9P258 522 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PAK5Q9P286 719 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 COPG2Q9UBF2 871 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CACNG5Q9UF02 275 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 LIMA1Q9UHB6 759 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PADI3Q9ULW8 664 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CYP46A1Q9Y6A2 500 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PRAG1Q86YV5 1406 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A1W2PP11 408 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 C1orf226A1L170 272 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 OR6C76A6NM76 312 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 KRTAP9-6A8MVA2 160 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 MAGEB17A8MXT2 336 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 H3BQ06 376 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PLK4O00444 970 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 IFRD1O00458 451 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 KLF11O14901 512 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ATP2A1O14983 1001 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SCAMP1O15126 338 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SMAD9O15198 467 aaKnown RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 HCRTR2O43614 444 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 NXPH2O95156 264 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 POLBP06746 335 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 CD48P09326 243 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 CEBPBP17676 345 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 AZU1P20160 251 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ABCD3P28288 659 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 HOXC13P31276 330 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 CEACAM8P31997 349 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 BSGP35613 385 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PTGER3P43115 390 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 MSH2P43246 934 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PSMC4P43686 418 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 HARS2P49590 506 aaKnown RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 CDH11P55287 796 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 HUNKP57058 714 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 TAS2R40P59535 323 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 LMO4P61968 165 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PRAMEP78395 509 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PPARDQ03181 441 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PRKCZQ05513 592 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 NIPAL4Q0D2K0 466 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 GAGE2BQ13066 116 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PLA2G7Q13093 441 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 RIGQ13278 110 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 RAPSNQ13702 412 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 MVPQ14764 893 aaKnown RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF239Q16600 458 aaKnown RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ALG11Q2TAA5 492 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 GAGE2EQ4V326 116 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 CXorf66Q5JRM2 361 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 LCE1FQ5T754 118 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 NSUN5P2Q63ZY6 315 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ACSM2BQ68CK6 577 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ADALQ6DHV7 355 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SPINK14Q6IE38 97 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 GAGE2AQ6NT46 116 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PWWP2BQ6NUJ5 590 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 TMEM154Q6P9G4 183 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 INO80CQ6PI98 192 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SEPT14Q6ZU15 432 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ANO5Q75V66 913 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 NOTCH2NLQ7Z3S9 236 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 LRRTM1Q86UE6 522 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 NRROSQ86YC3 692 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 KRTAP7-1Q8IUC3 87 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 TSPYL6Q8N831 410 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 TMEM178AQ8NBL3 297 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC38A9Q8NBW4 561 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 RBM15BQ8NDT2 890 aaKnown RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNRF4Q8WWF5 429 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ARHGAP45Q92619 1136 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SEMA4DQ92854 862 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 MTERF3Q96E29 417 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 ARSGQ96EG1 525 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 MMABQ96EY8 250 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 NR1H4Q96RI1 486 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 RTP3Q9BQQ7 232 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SYT11Q9BT88 431 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 CABLES2Q9BTV7 478 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 STRA6Q9BX79 667 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 C1QTNF1Q9BXJ1 281 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PIGMQ9H3S5 423 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 SH2D4AQ9H788 454 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PANK3Q9H999 370 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 JMJD4Q9H9V9 463 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 WASH6PQ9NQA3 447 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 PLCXD1Q9NUJ7 323 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 MIOSQ9NXC5 875 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 RRN3Q9NYV6 651 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 STK26Q9P289 416 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 KLHL9Q9P2J3 617 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 GAGE2DQ9UEU5 116 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 INTS6Q9UL03 887 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms