RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 PRRT4C9JH25 899 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 FFAR2O15552 330 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 VPS4BO75351 444 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 MAPRE2Q15555 327 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 RBBP7Q16576 425 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 CFAP61Q8NHU2 1237 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 IGFLR1Q9H665 355 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 PFDN4Q9NQP4 134 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 NDE1Q9NXR1 346 aa24.83■■□□□ 1.57
SHOX2-201ENST00000389589 EIF2B4Q9UI10 523 aaKnown RBP24.83■■□□□ 1.57
SHOX2-201ENST00000389589 ENO3P13929 434 aaPredicted RBP24.82■■□□□ 1.56
SHOX2-201ENST00000389589 PKNOX1P55347 436 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 FNDC3BQ53EP0 1204 aaKnown RBP24.82■■□□□ 1.56
SHOX2-201ENST00000389589 FBXO48Q5FWF7 155 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 C16orf89Q6UX73 402 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 TRAM1L1Q8N609 369 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 KYQ8NBH2 561 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 TIFAQ96CG3 184 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 DCUN1D1Q96GG9 259 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 ZNF382Q96SR6 550 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 SLC7A8Q9UHI5 535 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 TMPRSS11EQ9UL52 423 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 EDDM13A0A1B0GTR0 161 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 CFAP99D6REC4 459 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 PIP5K1BO14986 540 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 CHEK2O96017 543 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 UROSP10746 265 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 FCARP24071 287 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 MMP12P39900 470 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 FOXA1P55317 472 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 TMEM184AQ6ZMB5 413 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 DEFB107AQ8IZN7 70 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 ZNF366Q8N895 744 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 WDR60Q8WVS4 1066 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 CLPTM1LQ96KA5 538 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 ZSCAN5AQ9BUG6 496 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 RDH14Q9HBH5 336 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 ZFP14Q9HCL3 533 aa24.82■■□□□ 1.56
SHOX2-201ENST00000389589 TCF20Q9UGU0 1960 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 OTOL1A6NHN0 477 aaPredicted RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 ATP1B2P14415 290 aaPredicted RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 RALGDSQ12967 914 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 HNRNPA1L2Q32P51 320 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 KHDC1Q4VXA5 237 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 GPRIN3Q6ZVF9 776 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 Q6ZVL8 140 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 SYVN1Q86TM6 617 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 DDIASQ8IXT1 998 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 TMIEQ8NEW7 156 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 C3orf30Q96M34 536 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 APOL5Q9BWW9 433 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 AKTIPQ9H8T0 292 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 EFCAB1Q9HAE3 211 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 SLC28A3Q9HAS3 691 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 HPS4Q9NQG7 708 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 TSR3Q9UJK0 312 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 L3MBTL1Q9Y468 752 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 AIM2O14862 343 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 CCNT2O60583 730 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 VCLP18206 1134 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 AKT1P31749 480 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 NUDT2P50583 147 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 IRX1P78414 480 aaPredicted RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 PGM2L1Q6PCE3 622 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 RAVER1Q8IY67 606 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 CPA6Q8N4T0 437 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 STMN2Q93045 179 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 MRPL38Q96DV4 380 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 KCNA7Q96RP8 456 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 PTBP2Q9UKA9 531 aaKnown RBP24.81■■□□□ 1.56
SHOX2-201ENST00000389589 CDH7Q9ULB5 785 aa24.81■■□□□ 1.56
SHOX2-201ENST00000389589 EPOPA6NHQ4 379 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 PSMD11O00231 422 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 PSMD12O00232 456 aaPredicted RBP24.8■■□□□ 1.56
SHOX2-201ENST00000389589 KPNA3O00505 521 aaPredicted RBP24.8■■□□□ 1.56
SHOX2-201ENST00000389589 KPNA5O15131 536 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 HENMT1Q5T8I9 393 aaKnown RBP24.8■■□□□ 1.56
SHOX2-201ENST00000389589 METTL2BQ6P1Q9 378 aaKnown RBP24.8■■□□□ 1.56
SHOX2-201ENST00000389589 PARS2Q7L3T8 475 aaKnown RBP24.8■■□□□ 1.56
SHOX2-201ENST00000389589 OR8D1Q8WZ84 308 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 SCAMP4Q969E2 229 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 CCT7Q99832 543 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 ADAMTS6Q9UKP5 1117 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 DOCK8Q8NF50 2099 aa24.8■■□□□ 1.56
SHOX2-201ENST00000389589 ATP6AP2A0A1C7CYW4 349 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 ATP6AP2O75787 350 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 AP2A2O94973 939 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 AOAHP28039 575 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 ETV3P41162 512 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 STX1BP61266 288 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 MESP2Q0VG99 397 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 TBL3Q12788 808 aaKnown RBP24.79■■□□□ 1.56
SHOX2-201ENST00000389589 PTK2BQ14289 1009 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 FASTKQ14296 549 aaKnown RBP24.79■■□□□ 1.56
SHOX2-201ENST00000389589 ZNF284Q2VY69 593 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 TANGO2Q6ICL3 276 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 SULT1C3Q6IMI6 304 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 TECPR1Q7Z6L1 1165 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 NRSN1Q8IZ57 195 aa24.79■■□□□ 1.56
SHOX2-201ENST00000389589 ABCG8Q9H221 673 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms