RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CYP2A7P20853 494 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 CA4P22748 312 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 HCAR3P49019 387 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 ABRQ12979 859 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 HIF1AQ16665 826 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 SMTNL2Q2TAL5 461 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 KRTAP21-3Q3LHN1 58 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 ACAD10Q6JQN1 1059 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 Q6ZS92 163 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 SYTL1Q8IYJ3 562 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 NXPE1Q8N323 547 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 OR8K5Q8NH50 307 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 GDAP1Q8TB36 358 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 GLYATL1Q969I3 302 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 CNDP1Q96KN2 507 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 PPM1MQ96MI6 270 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 AGPAT1Q99943 283 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 TIMM29Q9BSF4 260 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 ACTR5Q9H9F9 607 aaPredicted RBP9.42□□□□□ -0.9
IFT88-203ENST00000389373 FANCEQ9HB96 536 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 CSAG2Q9Y5P2 127 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 CFAP20Q9Y6A4 193 aaKnown RBP9.42□□□□□ -0.9
IFT88-203ENST00000389373 OR6C74A6NCV1 312 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 TMEM150CB9EJG8 249 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 C9J4A7 227 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 CHUKO15111 745 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 EPHB6O15197 1021 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 PRLP01236 227 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 EDN3P14138 238 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 AGXTP21549 392 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 CDH3P22223 829 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 ZNF135P52742 658 aaPredicted RBP9.41□□□□□ -0.9
IFT88-203ENST00000389373 JAM2P57087 298 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 CDC16Q13042 620 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 ART3Q13508 389 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 GTF2H3Q13889 308 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 IHHQ14623 411 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 SSPNQ14714 243 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 NCF4Q15080 339 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 RPE65Q16518 533 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 QPCTQ16769 361 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 DCAF10Q5QP82 559 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 AGAP9Q5VTM2 703 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 FAM198BQ6UWH4 519 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 IGFL3Q6UXB1 125 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 WASH2PQ6VEQ5 465 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 SPOCD1Q6ZMY3 1216 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 MRGPREQ86SM8 312 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 TRAPPC5Q8IUR0 188 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 GPR26Q8NDV2 337 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 DNAJB14Q8TBM8 379 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 LRFN5Q96NI6 719 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 CD180Q99467 661 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 BARD1Q99728 777 aaKnown RBP9.41□□□□□ -0.9
IFT88-203ENST00000389373 TDRD1Q9BXT4 1180 aaKnown RBP9.41□□□□□ -0.9
IFT88-203ENST00000389373 CLSTN2Q9H4D0 955 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 LATS2Q9NRM7 1088 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 SAMSN1Q9NSI8 373 aaKnown RBP9.41□□□□□ -0.9
IFT88-203ENST00000389373 PCMTD2Q9NV79 361 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 PARVAQ9NVD7 372 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 RBM22Q9NW64 420 aaKnown RBP eCLIP9.41□□□□□ -0.9
IFT88-203ENST00000389373 GPN3Q9UHW5 284 aaPredicted RBP9.41□□□□□ -0.9
IFT88-203ENST00000389373 NOVA2Q9UNW9 492 aaKnown RBP9.41□□□□□ -0.9
IFT88-203ENST00000389373 SHOC2Q9UQ13 582 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 PADI2Q9Y2J8 665 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
IFT88-203ENST00000389373 OTOGQ6ZRI0 2925 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 RGSL1A5PLK6 1076 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 OR5K3A6NET4 321 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 SLC9B1P1A6NJY1 282 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 GPR89AB7ZAQ6 455 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 E2F3O00716 465 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 VEGFDO43915 354 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 STSP08842 583 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 PIRTP0C851 137 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 GPR89BP0CG08 455 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 POLR2CP19387 275 aaPredicted RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 HTR1EP28566 365 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 PBLDP30039 288 aaPredicted RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 SERPINB6P35237 376 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 RORAP35398 523 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 PTGER4P35408 488 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 ZNF165P49910 485 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 KPNA2P52292 529 aaKnown RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 NIPAL4Q0D2K0 466 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 XRCC4Q13426 336 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 MAMLD1Q13495 774 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 GALNT3Q14435 633 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 VWA2Q5GFL6 755 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 CYP4V2Q6ZWL3 525 aaPredicted RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 B4GALNT4Q76KP1 1039 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 POLNQ7Z5Q5 900 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 ZNF547Q8IVP9 402 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 RAVER1Q8IY67 606 aaKnown RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 TRAM1L1Q8N609 369 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 TEX26Q8N6G2 289 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 OR1L3Q8NH93 324 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms