RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PRUNE1Q86TP1 453 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 VASH2Q86V25 355 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 TAB3Q8N5C8 712 aaPredicted RBP18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 BLOC1S5Q8TDH9 187 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 NCSTNQ92542 709 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 PPP1R2P1Q96PQ5 205 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 TEFMQ96QE5 360 aaKnown RBP18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 TBC1D10AQ9BXI6 508 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 BPIFA1Q9NP55 256 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 OGFRQ9NZT2 677 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 ZNF148Q9UQR1 794 aa18.6■□□□□ 0.57
TMEM88B-201ENST00000378821 EFCAB7A8K855 629 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 MTX2O75431 263 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 IFNB1P01574 187 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 STIP1P31948 543 aaKnown RBP18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 UGT1A3P35503 534 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 DMPKQ09013 629 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 CCNG2Q16589 344 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 DCAF12Q5T6F0 453 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 KCTD11Q693B1 232 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 DRICH1Q6PGQ1 229 aaPredicted RBP18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 CRTC3Q6UUV7 619 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 ZNF605Q86T29 641 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 RASGEF1CQ8N431 466 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 EXD3Q8N9H8 876 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 GLIS1Q8NBF1 620 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 MAIP1Q8WWC4 291 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 MS4A14Q96JA4 679 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 PBKQ96KB5 322 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 TBL1YQ9BQ87 522 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 ZPBPQ9BS86 351 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 SLC40A1Q9NP59 571 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 PILRAQ9UKJ1 303 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 ZKSCAN5Q9Y2L8 839 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 PIEZO2Q9H5I5 2752 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 ZNF462Q96JM2 2506 aa18.59■□□□□ 0.57
TMEM88B-201ENST00000378821 ETS1P14921 441 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 MSNP26038 577 aaKnown RBP18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 SPAM1P38567 509 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 MSLNQ13421 630 aaPredicted RBP18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 INSCQ1MX18 579 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 GLT6D1Q7Z4J2 308 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 PLXDC1Q8IUK5 500 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 RBM12BQ8IXT5 1001 aaKnown RBP18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 ZSCAN1Q8NBB4 408 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 DDHD1Q8NEL9 900 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 SLC12A9Q9BXP2 914 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 OSGEPL1Q9H4B0 414 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 POT1Q9NUX5 634 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 SMOXQ9NWM0 555 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 DNMT3AQ9Y6K1 912 aaPredicted RBP18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 SLC30A1Q9Y6M5 507 aa18.58■□□□□ 0.56
TMEM88B-201ENST00000378821 B8ZZF3 427 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 TOX3O15405 576 aaPredicted RBP18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 CA5AP35218 305 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 ATP1A2P50993 1020 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 CHRNA6Q15825 494 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 LDLRAP1Q5SW96 308 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 ANKS6Q68DC2 871 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 DENND5AQ6IQ26 1287 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 FAM129CQ86XR2 697 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 PRELID2Q8N945 189 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 COG1Q8WTW3 980 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 OSBPL9Q96SU4 736 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 C19orf43Q9BQ61 176 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 SIDT1Q9NXL6 827 aaKnown RBP18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 SMARCAL1Q9NZC9 954 aa18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 TMEM184BQ9Y519 407 aaPredicted RBP18.57■□□□□ 0.56
TMEM88B-201ENST00000378821 GLYATL1P3A0A0U1RQE8 302 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 A8MU76 341 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 BUD23O43709 281 aaKnown RBP18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 UBXN7O94888 489 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 AP2A1O95782 977 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 VIPP01282 170 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 ZSCAN5DPP0CG00 497 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 IDSP22304 550 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 KCNJ1P48048 391 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 ITGA9Q13797 1035 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 CEACAM20Q6UY09 585 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 CCDC89Q8N998 374 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 RASGEF1AQ8N9B8 481 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 C9orf72Q96LT7 481 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 RAB33BQ9H082 229 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 LRRC40Q9H9A6 602 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 ETNK1Q9HBU6 452 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 EPHA6Q9UF33 1036 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 TTC7AQ9ULT0 858 aaPredicted RBP18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 SNX12Q9UMY4 172 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 DRG1Q9Y295 367 aaKnown RBP18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 DNAJC16Q9Y2G8 782 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 PKP3Q9Y446 797 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 ARL5AQ9Y689 179 aa18.56■□□□□ 0.56
TMEM88B-201ENST00000378821 AGAP14A8MT82 685 aa18.55■□□□□ 0.56
TMEM88B-201ENST00000378821 UGT1A9O60656 530 aa18.55■□□□□ 0.56
TMEM88B-201ENST00000378821 VCLP18206 1134 aa18.55■□□□□ 0.56
TMEM88B-201ENST00000378821 UGT1A6P19224 532 aa18.55■□□□□ 0.56
TMEM88B-201ENST00000378821 UGT1A1P22309 533 aa18.55■□□□□ 0.56
TMEM88B-201ENST00000378821 UGT1A4P22310 534 aa18.55■□□□□ 0.56
TMEM88B-201ENST00000378821 RPL10P27635 214 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms