RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 YIPF2Q9BWQ6 316 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 MIOSQ9NXC5 875 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 GIN1Q9NXP7 522 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 FAM50BQ9Y247 325 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 PCDHGA8Q9Y5G5 932 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SNX5Q9Y5X3 404 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TBC1D4O60343 1298 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 GLP2RO95838 553 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 FDXRP22570 491 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 GSTM2P28161 218 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 HTR1EP28566 365 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 CHRNB3Q05901 458 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SLC10A7Q0GE19 358 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 PPP1R8Q12972 351 aaKnown RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SPATS1Q496A3 300 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ANKS6Q68DC2 871 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 HS3ST5Q8IZT8 346 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ESAMQ96AP7 390 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 LRRC3Q9BY71 257 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 HMG20AQ9NP66 347 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 PCDH12Q9NPG4 1184 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 PDE10AQ9Y233 779 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TYW5A2RUC4 315 aaKnown RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 J3KR12 359 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 IRAK2O43187 625 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 VPS4BO75351 444 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 CHEK2O96017 543 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 PIRTP0C851 137 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 HTR1BP28222 390 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 CYP2C18P33260 490 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 HPCAL1P37235 193 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 ATN1P54259 1190 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 TUSC3Q13454 348 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 RBBP7Q16576 425 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 FAM98BQ52LJ0 330 aaKnown RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 RBM48Q5RL73 367 aaKnown RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 GLB1LQ6UWU2 654 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 SPATA19Q7Z5L4 167 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 C14orf80Q86SX3 495 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 DTWD1Q8N5C7 304 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 FNDC5Q8NAU1 212 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 FBXO30Q8TB52 745 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 ATOH8Q96SQ7 321 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 EXD2Q9NVH0 621 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 UXTQ9UBK9 157 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 PCDHB3Q9Y5E6 796 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 GNGT2O14610 69 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 GMNNO75496 209 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 GOT2P00505 430 aaKnown RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 AGXTP21549 392 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 LSM3P62310 102 aaKnown RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 OXA1LQ15070 435 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 PAN2Q504Q3 1202 aaKnown RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 SIRPB2Q5JXA9 342 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 SLCO6A1Q86UG4 719 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 ZNF555Q8NEP9 628 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 FIG4Q92562 907 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 HPS1Q92902 700 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 IMP4Q96G21 291 aaKnown RBP10.96□□□□□ -0.65
CCDC40-203ENST00000374877 ARNT2Q9HBZ2 717 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 SACM1LQ9NTJ5 587 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 MAGEL2Q9UJ55 1249 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 ARL5AQ9Y689 179 aa10.96□□□□□ -0.65
CCDC40-203ENST00000374877 E9PAM4 449 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 G3V2T6 193 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 UPK1AO00322 258 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 ENPP3O14638 875 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 CD3EAPO15446 510 aaKnown RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 ENO2P09104 434 aaPredicted RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 RAP2AP10114 183 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 IL12AP29459 219 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 ALDH4A1P30038 563 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 AGTR2P50052 363 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 CLCNKBP51801 687 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 AFF1P51825 1210 aaKnown RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 EMX2Q04743 252 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 LAPTM5Q13571 262 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 SELPLGQ14242 412 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 TSNQ15631 228 aaKnown RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 C6orf141Q5SZD1 244 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 MARC1Q5VT66 337 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 TTC23Q5W5X9 447 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 RTL3Q8N8U3 475 aaKnown RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 DBF4BQ8NFT6 615 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 TSPEARQ8WU66 669 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 HBEGFQ99075 208 aa10.96□□□□□ -0.66
CCDC40-203ENST00000374877 RBMX2Q9Y388 322 aaKnown RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 FAM32AQ9Y421 112 aaKnown RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 GPC6Q9Y625 555 aaPredicted RBP10.96□□□□□ -0.66
CCDC40-203ENST00000374877 HOXA2O43364 376 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 RHOBTB1O94844 696 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 INMTO95050 263 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PAPSS2O95340 614 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 ANXA6P08133 673 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 GSTT2P0CG29 244 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 GSTT2BP0CG30 244 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PRSS56P0CW18 603 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PIGAP37287 484 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 ZFP36L2P47974 494 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms