RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SNX13Q9Y5W8 968 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 FXYD1O00168 92 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 MLYCDO95822 493 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 CHEK2O96017 543 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 CTSAP10619 480 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 ATP4BP51164 291 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 TIGD2Q4W5G0 525 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 RABL3Q5HYI8 236 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 PAGE3Q5JUK9 113 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 C6orf52Q5T4I8 152 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 FOXB2Q5VYV0 432 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 PLPP4Q5VZY2 271 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 ZFP1Q6P2D0 407 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 TXNDC11Q6PKC3 985 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 CRTC1Q6UUV9 634 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 SPRED2Q7Z698 418 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 PCYOX1LQ8NBM8 494 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 OR4F6Q8NGB9 312 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 VOPP1Q96AW1 172 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 ASIC4Q96FT7 647 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 LINC00597Q9H2U6 94 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 LATS2Q9NRM7 1088 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 BCAP29Q9UHQ4 241 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 AP4S1Q9Y587 144 aa15.76■□□□□ 0.11
CNKSR1-202ENST00000374253 MYOCOSA0A1B0GUC4 107 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 ASPDHA6ND91 283 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 OR7A17O14581 309 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SYNCRIPO60506 623 aaKnown RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 ACRV1P26436 265 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SERPINA4P29622 427 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 WEE1P30291 646 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC7A9P82251 487 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 ILF2Q12905 390 aaKnown RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 GSTA3Q16772 222 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SAMD4BQ5PRF9 694 aaKnown RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 C8orf82Q6P1X6 216 aaPredicted RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 DPY19L3Q6ZPD9 716 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 Q6ZSR9 355 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 Q6ZVU0 165 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 RBFAQ8N0V3 343 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 NAT16Q8N8M0 369 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 CHST14Q8NCH0 376 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 FIBINQ8TAL6 211 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SORCS1Q8WY21 1168 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 NR1H4Q96RI1 486 aaPredicted RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 TCF25Q9BQ70 676 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 CMTM6Q9NX76 183 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 USP22Q9UPT9 525 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 HCFC2Q9Y5Z7 792 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 REV3LO60673 3130 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 TPST1O60507 370 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 MTX2O75431 263 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 TIPRLO75663 272 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 TIMP1P01033 207 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 IDO1P14902 403 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 LHCGRP22888 699 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 IL12AP29459 219 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 ADARP55265 1226 aaKnown RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 CDKL1Q00532 357 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 GTF2H2Q13888 395 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 PDK3Q15120 406 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 POM121L1PQ3SYA9 428 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC44A4Q53GD3 710 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SGO1Q5FBB7 561 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 GTF2H2CQ6P1K8 395 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 BLOC1S3Q6QNY0 202 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SPPL2CQ8IUH8 684 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC15A3Q8IY34 581 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 TMEM102Q8N9M5 508 aaPredicted RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 ST13P5Q8NFI4 369 aaPredicted RBP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 CNBD2Q96M20 576 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 TMEM74Q96NL1 305 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 IPPKQ9H8X2 491 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 ASAH2Q9NR71 780 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 FAM8A1Q9UBU6 413 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 GNPTGQ9UJJ9 305 aa15.75■□□□□ 0.11
CNKSR1-202ENST00000374253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 TAPBPO15533 448 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 NTHL1P78549 312 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 TEAD2Q15562 447 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 XKR7Q5GH72 579 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 C6orf136Q5SQH8 315 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 ZNF697Q5TEC3 545 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 CERS6Q6ZMG9 384 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 DHFR2Q86XF0 187 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 MYO1HQ8N1T3 1032 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 SFRP1Q8N474 314 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 CANT1Q8WVQ1 401 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 PPWD1Q96BP3 646 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 C1QTNF3Q9BXJ4 246 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 CRISPLD2Q9H0B8 497 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 MTG2Q9H4K7 406 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 PIDD1Q9HB75 910 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 FARSBQ9NSD9 589 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 NUDT4Q9NZJ9 180 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 SUFUQ9UMX1 484 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 AURKCQ9UQB9 309 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 PCDHB1Q9Y5F3 818 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 KIAA1671Q9BY89 1806 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms