RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PLEKHG4Q58EX7 1191 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 RIOX2Q8IUF8 465 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 TMEM139Q8IV31 216 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 OR8H3Q8N146 312 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 CPSF7Q8N684 471 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 C1orf21Q9H246 121 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 INTS10Q9NVR2 710 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 MID1O15344 667 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 F8A1P23610 371 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 AQP4P55087 323 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 CCL23P55773 120 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 CTBP1Q13363 440 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 GALNT6Q8NCL4 622 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 KCTD4Q8WVF5 259 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 ISPDA4D126 451 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 UGT2B4P06133 528 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 SLC7A1P30825 629 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 CXCR3P49682 368 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 TSPAN5P62079 268 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 MAPK14Q16539 360 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 ABCA11PQ4W5N1 156 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 KLHDC10Q6PID8 442 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 ZNF34Q8IZ26 560 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 CBR4Q8N4T8 237 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 OR4L1Q8NH43 312 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 WNT8BQ93098 351 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 GAL3ST4Q96RP7 486 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 SEC14L4Q9UDX3 406 aa11.4□□□□□ -0.59
SPTBN1-202ENST00000356805 PIAS1O75925 651 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 MSX2P35548 267 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 CHKAP35790 457 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 SCNN1GP51170 649 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 TLR1Q15399 786 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 BMT2Q1RMZ1 405 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 CMPK2Q5EBM0 449 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 ADAMTS15Q8TE58 950 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 RFKQ969G6 155 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 COQ8BQ96D53 544 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 COMMD4Q9H0A8 199 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 COLEC10Q9Y6Z7 277 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 H7C2Y5 167 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 TSPAN1O60635 241 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 TRUB2O95900 331 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 CSN2P05814 226 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 GPD2P43304 727 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 NXF3Q9H4D5 531 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 POLLQ9UGP5 575 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 NR2E3Q9Y5X4 410 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 AQP12BA6NM10 295 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 PGAM2P15259 253 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 LPOP22079 712 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 SLC6A4P31645 630 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 AQP12AQ8IXF9 295 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 OR52J3Q8NH60 311 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 C22orf31O95567 290 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 GRK5P34947 590 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 FSTL1Q12841 308 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 GPALPP1Q8IXQ4 340 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 MGME1Q9BQP7 344 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 EBF3Q9H4W6 596 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 XKR8Q9H6D3 395 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 LRRC4CQ9HCJ2 640 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 HCN3Q9P1Z3 774 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 MANSC4A6NHS7 340 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 MAN2A2P49641 1150 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 MECRQ9BV79 373 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 SNX15Q9NRS6 342 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 ZNF99A8MXY4 864 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 CCL16O15467 120 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 OR1I1O60431 355 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 TPSB2P20231 275 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 TPSAB1Q15661 275 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 C17orf64Q86WR6 236 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 PREBQ9HCU5 417 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 POMPQ9Y244 141 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 TRAF6Q9Y4K3 522 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 SCGB1D2O95969 90 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 PLGP00747 810 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 GOT1P17174 413 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 AIF1P55008 147 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 VWA5B1Q5TIE3 1220 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 FAM83AQ86UY5 434 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 SPERTQ8NA61 448 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 SLC6A15Q9H2J7 730 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 PDP1Q9P0J1 537 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 FZD1Q9UP38 647 aa11.39□□□□□ -0.59
SPTBN1-202ENST00000356805 MYO3AQ8NEV4 1616 aa11.38□□□□□ -0.59
SPTBN1-202ENST00000356805 CPS1P31327 1500 aa11.38□□□□□ -0.59
SPTBN1-202ENST00000356805 hCG_1818297A0A087WSY0 165 aa11.38□□□□□ -0.59
SPTBN1-202ENST00000356805 ZSCAN5BA6NJL1 495 aa11.38□□□□□ -0.59
SPTBN1-202ENST00000356805 A8MUI8 341 aa11.38□□□□□ -0.59
SPTBN1-202ENST00000356805 CLPXO76031 633 aa11.38□□□□□ -0.59
SPTBN1-202ENST00000356805 PSEN1P49768 467 aa11.38□□□□□ -0.59
SPTBN1-202ENST00000356805 GDI2P50395 445 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms