RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 RPL10LQ96L21 214 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 STATHP02808 62 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 KDELR1P24390 212 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 ANTXR2P58335 489 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 RBM39Q14498 530 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 SHQ1Q6PI26 577 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 FIP1L1Q6UN15 594 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 OR8H1Q8NGG4 311 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 RADILQ96JH8 1075 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 RPP38P78345 283 aaKnown RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CDK10Q15131 360 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 LDLRAP1Q5SW96 308 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 MINDY2Q8NBR6 621 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 GRIN2DO15399 1336 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CD44P16070 742 aaKnown RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CD247P20963 164 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CORO7P57737 925 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 GDF6Q6KF10 455 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 DIRAS2Q96HU8 199 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF700Q9H0M5 742 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 MT-CYBP00156 380 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 MT-ND1P03886 318 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CMTR2Q8IYT2 770 aaKnown RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 GMEB1Q9Y692 573 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 SPATA31A6Q5VVP1 1343 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 PAPSS2O95340 614 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 C10orf107Q8IVU9 208 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 ACTRT1Q8TDG2 376 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CNDP2Q96KP4 475 aaKnown RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF184Q99676 751 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 PDP1Q9P0J1 537 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 MLXQ9UH92 298 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 TMX2Q9Y320 296 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 EME2A4GXA9 379 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 ITIH1P19827 911 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 C1QTNF8P60827 252 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 DEFA5Q01523 94 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 E2F2Q14209 437 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 PLET1Q6UQ28 207 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 ARHGAP22Q7Z5H3 698 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 APOLD1Q96LR9 279 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 POLMQ9NP87 494 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-201ENST00000356083 PDPK1O15530 556 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CBLP22681 906 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 SLC1A2P43004 574 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 TGFB2P61812 414 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 TMEM145Q8NBT3 493 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 TBCBQ99426 244 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 MEAF6Q9HAF1 191 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
COL27A1-201ENST00000356083 CHST10O43529 356 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 GLI1P08151 1106 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 MAPK8P45983 427 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 DLG2Q15700 870 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 DCST1Q5T197 706 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 CCDC80Q76M96 950 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.33
COL27A1-201ENST00000356083 ZSCAN4Q8NAM6 433 aaPredicted RBP17.08■□□□□ 0.33
COL27A1-201ENST00000356083 MYO19Q96H55 970 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 MRPL57Q9BQC6 102 aaKnown RBP17.08■□□□□ 0.33
COL27A1-201ENST00000356083 PPP1R14DQ9NXH3 145 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 RLN2P04090 185 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 PTPRAP18433 802 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 FAPQ12884 760 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 BICRALQ6AI39 1079 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 C12orf66Q96MD2 445 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 CLDND1Q9NY35 253 aa17.08■□□□□ 0.33
COL27A1-201ENST00000356083 ACKR2O00590 384 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 IDNKQ5T6J7 187 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 HEATR1Q9H583 2144 aaKnown RBP17.08■□□□□ 0.32
COL27A1-201ENST00000356083 OR2AT4A6NND4 320 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 BTBD19C9JJ37 291 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 DDX3YO15523 660 aaKnown RBP17.08■□□□□ 0.32
COL27A1-201ENST00000356083 RARAP10276 462 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 ATP4AP20648 1035 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 PSEN1P49768 467 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 OLFML1Q6UWY5 402 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 HECW2Q9P2P5 1572 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 A0A0A0MRY4 1105 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 CROCCP3Q8IVE0 287 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF565Q8N9K5 539 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 FBXO22Q8NEZ5 403 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 NXPE2Q96DL1 559 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 SPATA13Q96N96 652 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 DGAT2Q96PD7 388 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 FBXL3Q9UKT7 428 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 PRAMEF33A0A0G2JMD5 474 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 H0YGN5 161 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 PRAMEF10O60809 474 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 CSTF2P33240 577 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL27A1-201ENST00000356083 CXCL9Q07325 125 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 HOMEZQ8IX15 550 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
COL27A1-201ENST00000356083 SLC22A3O75751 556 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 RPP14O95059 124 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 RENP00797 406 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms