RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GLIS1Q8NBF1 620 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 RTP4Q96DX8 246 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 DNAJC1Q96KC8 554 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 ASB8Q9H765 288 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 ARNT2Q9HBZ2 717 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 WASH6PQ9NQA3 447 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 SLC39A1Q9NY26 324 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 FAM8A1Q9UBU6 413 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 PKP3Q9Y446 797 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 BAHCC1Q9P281 2608 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 CCDC78A2IDD5 438 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 B4E171 279 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 VIPP01282 170 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 ETS1P14921 441 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 IDSP22304 550 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 TSPAN7P41732 249 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 SH3BP2P78314 561 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 DMPKQ09013 629 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 RPE65Q16518 533 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 LDLRAP1Q5SW96 308 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 EXD3Q8N9H8 876 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 SH3KBP1Q96B97 665 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 DPYSL5Q9BPU6 564 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 UCK1Q9HA47 277 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 GUCA1BQ9UMX6 200 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 AAR2Q9Y312 384 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 PCDHGA4Q9Y5G9 962 aa16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 SNRNP200O75643 2136 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-201ENST00000355572 UBXN7O94888 489 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 SLC2A4P14672 509 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 ZNF28P17035 718 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 GRIA1P42261 906 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 MC2RQ01718 297 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 RHDQ02161 417 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 ITGA9Q13797 1035 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 SIX1Q15475 284 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 OASLQ15646 514 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 ZNF658BQ4V348 819 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 CERS6Q6ZMG9 384 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 AMZ2Q86W34 360 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 UBL4BQ8N7F7 174 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 C9orf72Q96LT7 481 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 RMDN2Q96LZ7 410 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 TGM7Q96PF1 710 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 INSM2Q96T92 566 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 DDA1Q9BW61 102 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 B3GNT4Q9C0J1 378 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 WWP1Q9H0M0 922 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 STN1Q9H668 368 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 POT1Q9NUX5 634 aa16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 FASNP49327 2511 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-201ENST00000355572 OR51F1A6NGY5 319 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 C2orf81A6NN90 581 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 CAPN5O15484 640 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 ZW10O43264 779 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 LIFP15018 202 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 AKT1P31749 480 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 SEPHS1P49903 392 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 PRPSAP1Q14558 356 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 PARP6Q2NL67 630 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 TAF1BQ53T94 588 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 MANEAQ5SRI9 462 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 ZDHHC20Q5W0Z9 365 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 ARHGEF18Q6ZSZ5 1173 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 PIANPQ8IYJ0 282 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 SYCE1Q8N0S2 351 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 C1orf54Q8WWF1 131 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 EXTL1Q92935 676 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 PPM1MQ96MI6 270 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 TTC25Q96NG3 672 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 AKAP7Q9P0M2 348 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 PILRAQ9UKJ1 303 aa16.38■□□□□ 0.21
PDLIM7-201ENST00000355572 COL6A6A6NMZ7 2263 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 LOC101059948A0A1B0GTJ6 334 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 STMND1H3BQB6 276 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 TK2O00142 265 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 LIASO43766 372 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 RAD1O60671 282 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 PPFIA2O75334 1257 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 ANKRD34CP0C6C1 535 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 MSH3P20585 1137 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 MC4RP32245 332 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 TNNT3P45378 269 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 CAPZBP47756 277 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 POU6F1Q14863 301 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 CCDC38Q502W7 563 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 METRNLQ641Q3 311 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 FAM92BQ6ZTR7 304 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 SLC13A5Q86YT5 568 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 UNC5BQ8IZJ1 945 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms