RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 MRPS30Q9NP92 439 aaKnown RBP15.28■□□□□ 0.04
PTPRO-202ENST00000348962 SIN3BO75182 1162 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 RB1P06400 928 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 SAGP10523 405 aaPredicted RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 UROSP10746 265 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 PRPS2P11908 318 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 AGXTP21549 392 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 RPP38P78345 283 aaKnown RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 SLC13A2Q13183 592 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 OAFQ86UD1 273 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 TTLQ8NG68 377 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 NMD3Q96D46 503 aaKnown RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 DGCR6LQ9BY27 220 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 CCSER2Q9H7U1 834 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 ITM2CQ9NQX7 267 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 CMTM6Q9NX76 183 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 FBXL12Q9NXK8 326 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 ZNF180Q9UJW8 692 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 ACP5P13686 325 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 HOXB2P14652 356 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 CPN2P22792 545 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 NRG1Q02297 640 aaPredicted RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 ZIK1Q3SY52 487 aaPredicted RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 FAM43BQ6ZT52 329 aaPredicted RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 ADCY4Q8NFM4 1077 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 ZNF184Q99676 751 aaPredicted RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 SLC2A4RGQ9NR83 387 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 SLIT2O94813 1529 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 MAGEB3O15480 346 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 TMCC2O75069 709 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 VNN1O95497 513 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 TNFP01375 233 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 C1QTNF8P60827 252 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 FAM46DQ8NEK8 389 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 RASSF5Q8WWW0 418 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 GTPBP2Q9BX10 602 aaKnown RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 TDRD1Q9BXT4 1180 aaKnown RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 ERVK-5Q9HDB9 667 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 POLR3BQ9NW08 1133 aaPredicted RBP15.27■□□□□ 0.04
PTPRO-202ENST00000348962 CDH7Q9ULB5 785 aa15.27■□□□□ 0.04
PTPRO-202ENST00000348962 LOC100506127A0A0U1RQW1 187 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 MPSTP25325 297 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 ALDH4A1P30038 563 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 POLR2JP52435 117 aaKnown RBP15.27■□□□□ 0.03
PTPRO-202ENST00000348962 UBAP2LQ14157 1087 aaKnown RBP15.27■□□□□ 0.03
PTPRO-202ENST00000348962 TMEM63BQ5T3F8 832 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 GCNT6Q5T4J0 391 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 ZNF730Q6ZMV8 503 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 CADM2Q8N3J6 435 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 PIK3C3Q8NEB9 887 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 ZNF384Q8TF68 577 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 ZSCAN5AQ9BUG6 496 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 CCDC28BQ9BUN5 200 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 MINDY3Q9H8M7 445 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 SLCO1B3Q9NPD5 702 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 REXO2Q9Y3B8 237 aaKnown RBP15.27■□□□□ 0.03
PTPRO-202ENST00000348962 NID2Q14112 1375 aa15.27■□□□□ 0.03
PTPRO-202ENST00000348962 KIF1CO43896 1103 aaKnown RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 NMBRP28336 390 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 IL12BP29460 328 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 CTSOP43234 321 aaPredicted RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 SPIRE1Q08AE8 756 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 WDR45BQ5MNZ6 344 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 SYPL2Q5VXT5 272 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 DAW1Q8N136 415 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 ZMIZ2Q8NF64 920 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 SUN3Q8TAQ9 357 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 NEK7Q8TDX7 302 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 CLEC4CQ8WTT0 213 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 ANKHQ9HCJ1 492 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 GDAP2Q9NXN4 497 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 SLC17A7Q9P2U7 560 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 SCML2Q9UQR0 700 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 UBR1Q8IWV7 1749 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 PLEKHG4Q58EX7 1191 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 FAM91A1Q658Y4 838 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 SLC25A24Q6NUK1 477 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 CXXC5Q7LFL8 322 aaKnown RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 TMEM110Q86TL2 294 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 ZNF540Q8NDQ6 660 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 PTPN18Q99952 460 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 GSDMCQ9BYG8 508 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 CRISPLD1Q9H336 500 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 ADGRE2Q9UHX3 823 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 PACSIN3Q9UKS6 424 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 EDF1O60869 148 aaKnown RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 CCKBRP32239 447 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 TAB1Q15750 504 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 LRRC73Q5JTD7 316 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 SFRP1Q8N474 314 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 C11orf65Q8NCR3 313 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 VANGL1Q8TAA9 524 aaPredicted RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 ZHX1-C8orf76Q96EF9 292 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 CLEC4MQ9H2X3 399 aaPredicted RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 TOR4AQ9NXH8 423 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 MRPL39Q9NYK5 338 aaKnown RBP15.26■□□□□ 0.03
PTPRO-202ENST00000348962 WNT6Q9Y6F9 365 aa15.26■□□□□ 0.03
PTPRO-202ENST00000348962 C9IYK1 514 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms