RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CDH19Q9H159 772 aa15.86■□□□□ 0.13
RAB5C-201ENST00000346213 ABCG4Q9H172 646 aa15.86■□□□□ 0.13
RAB5C-201ENST00000346213 SEMA6CQ9H3T2 930 aa15.86■□□□□ 0.13
RAB5C-201ENST00000346213 LRRN3Q9H3W5 708 aa15.86■□□□□ 0.13
RAB5C-201ENST00000346213 ZNF106Q9H2Y7 1883 aaKnown RBP15.85■□□□□ 0.13
RAB5C-201ENST00000346213 KIF26BQ2KJY2 2108 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 GOLGA6L10A6NI86 522 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 RIPK2O43353 540 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 SGTAO43765 313 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 SLC25A14O95258 325 aaPredicted RBP15.85■□□□□ 0.13
RAB5C-201ENST00000346213 IFNB1P01574 187 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 HOXB3P14651 431 aaPredicted RBP15.85■□□□□ 0.13
RAB5C-201ENST00000346213 BRAFP15056 766 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 GRIA1P42261 906 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 GYS2P54840 703 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 GEMP55040 296 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 RNASEH2BQ5TBB1 312 aaKnown RBP15.85■□□□□ 0.13
RAB5C-201ENST00000346213 CCDC25Q86WR0 208 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 SLITRK4Q8IW52 837 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 SFRP1Q8N474 314 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 SCG3Q8WXD2 468 aaKnown RBP15.85■□□□□ 0.13
RAB5C-201ENST00000346213 GLMNQ92990 594 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 PLEKHG4BQ96PX9 1271 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 FSD1LQ9BXM9 530 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 CDC42EP4Q9H3Q1 356 aaKnown RBP15.85■□□□□ 0.13
RAB5C-201ENST00000346213 PRDM8Q9NQV8 689 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 FKBPLQ9UIM3 349 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 KNTC1P50748 2209 aa15.85■□□□□ 0.13
RAB5C-201ENST00000346213 GRID2O43424 1007 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 NUDT21O43809 227 aaKnown RBP15.84■□□□□ 0.13
RAB5C-201ENST00000346213 MYZAPP0CAP1 466 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 TPH1P17752 444 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 CD1CP29017 333 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 RPL22P35268 128 aaKnown RBP15.84■□□□□ 0.13
RAB5C-201ENST00000346213 CDKN1CP49918 316 aaPredicted RBP15.84■□□□□ 0.13
RAB5C-201ENST00000346213 ZNF140P52738 457 aaPredicted RBP15.84■□□□□ 0.13
RAB5C-201ENST00000346213 PEX6Q13608 980 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 SLC29A2Q14542 456 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 ITPRIPL1Q6GPH6 555 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 FAM83HQ6ZRV2 1179 aaPredicted RBP15.84■□□□□ 0.13
RAB5C-201ENST00000346213 RASGEF1AQ8N9B8 481 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 OR4K2Q8NGD2 314 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 FAM76AQ8TAV0 307 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 ATP6V1G3Q96LB4 118 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 VPS35Q96QK1 796 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 TBL1YQ9BQ87 522 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 TMEM109Q9BVC6 243 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 TRIM39Q9HCM9 518 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 PSD3Q9NYI0 1048 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 AK5Q9Y6K8 562 aa15.84■□□□□ 0.13
RAB5C-201ENST00000346213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.83■□□□□ 0.13
RAB5C-201ENST00000346213 HMGB1P1B2RPK0 211 aaPredicted RBP15.83■□□□□ 0.13
RAB5C-201ENST00000346213 SMAPO00193 183 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 LDB2O43679 373 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 TCEA3O75764 348 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 PYGLP06737 847 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 SPAM1P38567 509 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 ETV5P41161 510 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 ZFP36L1Q07352 338 aaKnown RBP15.83■□□□□ 0.13
RAB5C-201ENST00000346213 IFFO1Q0D2I5 559 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 SPIDRQ14159 915 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.83■□□□□ 0.13
RAB5C-201ENST00000346213 AGBL2Q5U5Z8 902 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 CROCCP2Q86T23 111 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 PMEPA1Q969W9 287 aa15.83■□□□□ 0.13
RAB5C-201ENST00000346213 GFM1Q96RP9 751 aaKnown RBP15.83■□□□□ 0.13
RAB5C-201ENST00000346213 MGAQ8IWI9 3026 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 ACACAQ13085 2346 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 ANXA9O76027 345 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 TTC4O95801 387 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 MPSTP25325 297 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 TMPRSS15P98073 1019 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 C16orf72Q14CZ0 275 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 COL28A1Q2UY09 1125 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 TBC1D25Q3MII6 688 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 AMZ1Q400G9 498 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 GPRC6AQ5T6X5 926 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 USP53Q70EK8 1073 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 HOOK3Q86VS8 718 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 PHYKPLQ8IUZ5 450 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 PPIL6Q8IXY8 311 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 TRABDQ9H4I3 376 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 FAM96AQ9H5X1 160 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 ARNT2Q9HBZ2 717 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 KLC4Q9NSK0 619 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 DNAJC16Q9Y2G8 782 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 WDR37Q9Y2I8 494 aa15.83■□□□□ 0.12
RAB5C-201ENST00000346213 A0A087WV48 116 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 IGHV1OR21-1A0A087WYE8 117 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 GLYATL1P3A0A0U1RQE8 302 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 CCDC78A2IDD5 438 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 SNX2O60749 519 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 SHBGP04278 402 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 PNLIPP16233 465 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 ITIH1P19827 911 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 EIF2S3P41091 472 aaKnown RBP15.82■□□□□ 0.12
RAB5C-201ENST00000346213 LRP8Q14114 963 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 TAF1AQ15573 450 aaPredicted RBP15.82■□□□□ 0.12
RAB5C-201ENST00000346213 KRT71Q3SY84 523 aa15.82■□□□□ 0.12
RAB5C-201ENST00000346213 IYDQ6PHW0 289 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms