RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 INPP5DQ92835 1189 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ECHDC3Q96DC8 303 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ZFYVE19Q96K21 471 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 OR52B2Q96RD2 323 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 HTATIP2Q9BUP3 242 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 BOCQ9BWV1 1114 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 APOL5Q9BWW9 433 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 TBC1D10AQ9BXI6 508 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 NUF2Q9BZD4 464 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CEP44Q9C0F1 390 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 MTG2Q9H4K7 406 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 WDR55Q9H6Y2 383 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 TNFRSF12AQ9NP84 129 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 IL26Q9NPH9 171 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 DUS2Q9NX74 493 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PPM1HQ9ULR3 514 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ERVW-1Q9UQF0 538 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 OAS3Q9Y6K5 1087 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 SLC30A1Q9Y6M5 507 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CXorf51AA0A1B0GTR3 108 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 EPOPA6NHQ4 379 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TTC34A8MYJ7 566 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 E9PBE3 544 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 MGRN1O60291 552 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 KLHL41O60662 606 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 POP4O95707 220 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 GHRHP01286 108 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PF4P02776 101 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 ATP5BP06576 529 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 POU2F2P09086 479 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TSPAN8P19075 237 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 POLR2EP19388 210 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CALB2P22676 271 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SULT2A1Q06520 285 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CHRNA6Q15825 494 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 DUSP6Q16828 381 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 AARS2Q5JTZ9 985 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SEL1L3Q68CR1 1132 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 LRRC66Q68CR7 880 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 KIAA0907Q7Z7F0 614 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 C12orf40Q86WS4 652 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CELF5Q8N6W0 485 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 KDM1BQ8NB78 822 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PHC3Q8NDX5 983 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 OR2A12Q8NGT7 310 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 OTUB2Q96DC9 234 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CNDP1Q96KN2 507 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 MRGPRX3Q96LB0 322 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SAMD11Q96NU1 681 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TUBGCP5Q96RT8 1024 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 RSRP1Q9BUV0 290 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PBX4Q9BYU1 374 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 P2RY12Q9H244 342 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 ZNF576Q9H609 170 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 ASB8Q9H765 288 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SARS2Q9NP81 518 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 GTSE1Q9NYZ3 720 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 DPP7Q9UHL4 492 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 DOCK8Q8NF50 2099 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 NPEPPSL1A6NEC2 478 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 LRRC14BA6NHZ5 514 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 F8W8V4 182 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CDC7O00311 574 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SLC9A3R1O14745 358 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PFDN6O15212 129 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 HDAC3O15379 428 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 VPS26AO75436 327 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TSPAN12O95859 305 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CISD3P0C7P0 127 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 MTHFD2P13995 350 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 ARSAP15289 507 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 NCF2P19878 526 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CHRM3P20309 590 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 LHCGRP22888 699 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 EPHA3P29320 983 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PEX19P40855 299 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PTGER3P43115 390 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 RASSF2P50749 326 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 ROR2Q01974 943 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 KDSRQ06136 332 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 RAD51Q06609 339 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 MESP2Q0VG99 397 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 NFATC2Q13469 925 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 DMC1Q14565 340 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 NAA25Q14CX7 972 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TSNQ15631 228 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 UNC50Q53HI1 259 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 FAM78AQ5JUQ0 283 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SH2D4BQ5SQS7 431 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SLC30A9Q6PML9 568 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SNX20Q7Z614 316 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SLC22A9Q8IVM8 553 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 AHI1Q8N157 1196 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PTGR2Q8N8N7 351 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 B4GALNT2Q8NHY0 566 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CD200R1Q8TD46 325 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 FRS2Q8WU20 508 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 OSCP1Q8WVF1 389 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SPDL1Q96EA4 605 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms