RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ERVH48-1M5A8F1 160 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 SGTAO43765 313 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 DUX1O43812 170 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 POP7O75817 140 aaKnown RBP14.17□□□□□ -0.14
HMGN3-202ENST00000344726 CRTAMO95727 393 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 AP2A1O95782 977 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 CCDC175P0C221 793 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 EPHA4P54764 986 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 TRA2AQ13595 282 aaKnown RBP eCLIP14.17□□□□□ -0.14
HMGN3-202ENST00000344726 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 RPS6KA1Q15418 735 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 XKR5Q6UX68 686 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 WASH2PQ6VEQ5 465 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 CCDC81Q6ZN84 652 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 DET1Q7L5Y6 550 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 BEND7Q8N7W2 519 aaPredicted RBP14.17□□□□□ -0.14
HMGN3-202ENST00000344726 BMPERQ8N8U9 685 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 GLIS1Q8NBF1 620 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 SH3KBP1Q96B97 665 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 SGF29Q96ES7 293 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 AHCYL2Q96HN2 611 aaKnown RBP14.17□□□□□ -0.14
HMGN3-202ENST00000344726 DNAJC1Q96KC8 554 aaKnown RBP14.17□□□□□ -0.14
HMGN3-202ENST00000344726 STN1Q9H668 368 aaKnown RBP14.17□□□□□ -0.14
HMGN3-202ENST00000344726 ASB8Q9H765 288 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 LRRC40Q9H9A6 602 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 WASH6PQ9NQA3 447 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 OGFRQ9NZT2 677 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 SLC30A1Q9Y6M5 507 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 PIEZO2Q9H5I5 2752 aa14.17□□□□□ -0.14
HMGN3-202ENST00000344726 LILRA5A6NI73 299 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 TK2O00142 265 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 PRSS56P0CW18 603 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 ETS1P14921 441 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 IDSP22304 550 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 MAPK9P45984 424 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 CDKN1CP49918 316 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-202ENST00000344726 RHDQ02161 417 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 DMPKQ09013 629 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 SNX1Q13596 522 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 NFE2L1Q14494 772 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 P3H1Q32P28 736 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 AGAP9Q5VTM2 703 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 WDR74Q6RFH5 385 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-202ENST00000344726 TMEM26Q6ZUK4 368 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 ARHGAP22Q7Z5H3 698 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 AMZ2Q86W34 360 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 LSM14AQ8ND56 463 aaKnown RBP14.16□□□□□ -0.14
HMGN3-202ENST00000344726 JPH3Q8WXH2 748 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-202ENST00000344726 NCSTNQ92542 709 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 ART4Q93070 314 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 DPYSL5Q9BPU6 564 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 TLR10Q9BXR5 811 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-202ENST00000344726 ZCCHC2Q9C0B9 1178 aaKnown RBP14.16□□□□□ -0.14
HMGN3-202ENST00000344726 FAM96AQ9H5X1 160 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 UCK1Q9HA47 277 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 WDR70Q9NW82 654 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 FEZ2Q9UHY8 353 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-202ENST00000344726 B3GALT1Q9Y5Z6 326 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 BSNQ9UPA5 3926 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 BOD1L1Q8NFC6 3051 aa14.16□□□□□ -0.14
HMGN3-202ENST00000344726 A8MU76 341 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-202ENST00000344726 VIPP01282 170 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 MSH3P20585 1137 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 PBLDP30039 288 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-202ENST00000344726 AKT1P31749 480 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 STIP1P31948 543 aaKnown RBP14.15□□□□□ -0.14
HMGN3-202ENST00000344726 PPM1FP49593 454 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-202ENST00000344726 GFERP55789 205 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 PDE1BQ01064 536 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 LY6DQ14210 128 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 POU6F1Q14863 301 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 SNAP47Q5SQN1 464 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 FNBP1LQ5T0N5 605 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 TRIM48Q8IWZ4 208 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 ZNF843Q8N446 348 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 AVL9Q8NBF6 648 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 AGBL5Q8NDL9 886 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 GPR150Q8NGU9 434 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 UBE2Q2Q8WVN8 375 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 TAAR9Q96RI9 348 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 C19orf43Q9BQ61 176 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 SLC40A1Q9NP59 571 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 PSMD13Q9UNM6 376 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 ZNF148Q9UQR1 794 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 PPP2R2CQ9Y2T4 447 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
HMGN3-202ENST00000344726 DNMT3AQ9Y6K1 912 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-202ENST00000344726 TRBV5-4A0A0C4DH59 114 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 CCDC78A2IDD5 438 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 EIF4E1BA6NMX2 242 aaKnown RBP14.14□□□□□ -0.15
HMGN3-202ENST00000344726 EFCAB7A8K855 629 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 KCNJ13O60928 360 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 IFNB1P01574 187 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 TYRP1P17643 537 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 VCLP18206 1134 aa14.14□□□□□ -0.15
HMGN3-202ENST00000344726 MC4RP32245 332 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms