RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 HIST1H2ABP04908 130 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 GSNP06396 782 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 PWP1Q13610 501 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 ALFQ53S48 1182 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 HIST3H2AQ7L7L0 130 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 C14orf80Q86SX3 495 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 ITFG1Q8TB96 612 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 HIST1H2ACQ93077 130 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 NXNL1Q96CM4 212 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 DPYSL5Q9BPU6 564 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 BTBD10Q9BSF8 475 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 RPS6KA6Q9UK32 745 aa16.21■□□□□ 0.18
SMARCA4-201ENST00000344626 ASXL3Q9C0F0 2248 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 DEAF1O75398 565 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 LEFTY1O75610 366 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 ARSAP15289 507 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 AVPR1BP47901 424 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 SOX9P48436 509 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 FBXW10Q5XX13 1052 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC9A4Q6AI14 798 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 ERN2Q76MJ5 926 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 NCSTNQ92542 709 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 GTPBP1O00178 669 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 RPL10P27635 214 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 VHLP40337 213 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 ELAVL3Q14576 367 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 PUS10Q3MIT2 529 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 FGD3Q5JSP0 725 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 LRRC15Q8TF66 581 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 SEPHS2Q99611 448 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 NOD2Q9HC29 1040 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 LCHNA4D1U4 455 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 ANKRD66B4E2M5 251 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 AXIN1O15169 862 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 BPGMP07738 259 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 SRPRAP08240 638 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 DRD1P21728 446 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 CDH13P55290 713 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 ZNF542PQ5EBM4 170 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 PRRT3Q5FWE3 981 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 SIRPB2Q5JXA9 342 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 SCIMPQ6UWF3 145 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 DPY19L3Q6ZPD9 716 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 CCM2Q9BSQ5 444 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 IPPKQ9H8X2 491 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 EXD2Q9NVH0 621 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 UBOX5O94941 541 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 CLCNKAP51800 687 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 MANFP55145 182 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 ARHGEF3Q9NR81 526 aa16.2■□□□□ 0.18
SMARCA4-201ENST00000344626 A0A1W2PQU0 124 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 SIM2Q14190 667 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 ADGRD1Q6QNK2 874 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 SIDT2Q8NBJ9 832 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 PANX1Q96RD7 426 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 PLLPQ9Y342 182 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 SPTA1P02549 2419 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 CCDC162PA2VCL2 907 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 SOCS5O75159 536 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 GSRP00390 522 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 GDF10P55107 478 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 PKNOX1P55347 436 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 POLE2P56282 527 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 DGKKQ5KSL6 1271 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 TTC33Q6PID6 262 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 LYSMD3Q7Z3D4 306 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 UNC5BQ8IZJ1 945 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 RLN3Q8WXF3 142 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 DNAJC9Q8WXX5 260 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 AZIN2Q96A70 460 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 MIPEPQ99797 713 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 TBCDQ9BTW9 1192 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 ALKBH4Q9NXW9 302 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 LZTS1Q9Y250 596 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 SIT1Q9Y3P8 196 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 RUNX1T1Q06455 604 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 BIKQ13323 160 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 MOGSQ13724 837 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 CPTPQ5TA50 214 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 ZC3H7AQ8IWR0 971 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 FBRSQ9HAH7 460 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 CFAP20Q9Y6A4 193 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 STON1Q9Y6Q2 735 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 NUMBLQ9Y6R0 609 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 OR1F1O43749 312 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 SERPINB7O75635 380 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 PIK3R1P27986 724 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 OXTRP30559 389 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 C15orf39Q6ZRI6 1047 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 DDX1Q92499 740 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 LRTM1Q9HBL6 345 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 ITM2CQ9NQX7 267 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 ABI3Q9P2A4 366 aa16.19■□□□□ 0.18
SMARCA4-201ENST00000344626 DYTNA2CJ06 578 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 CLDN7O95471 211 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 SEC24AO95486 1093 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 LDLRP01130 860 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 SYPP08247 313 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms