RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 TRPC4Q9UBN4 977 aa12.4□□□□□ -0.43
SSX2IP-201ENST00000342203 FUCA1P04066 466 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 CDH5P33151 784 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 CASP9P55211 416 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 NIPAL4Q0D2K0 466 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 RFTN1Q14699 578 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 MZT2BQ6NZ67 158 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 PTCHD4Q6ZW05 846 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 LRRC52Q8N7C0 313 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 GPR156Q8NFN8 814 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 PHF10Q8WUB8 498 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 CLN6Q9NWW5 311 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 VPS28Q9UK41 221 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 BTBD19C9JJ37 291 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 CYP11A1P05108 521 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 CYP2B6P20813 491 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 SLC15A1P46059 708 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 HERVK_113P63132 956 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 PTPRCAPQ14761 206 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 PABPC1LQ4VXU2 614 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 RAVER1Q8IY67 606 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 GPR152Q8TDT2 470 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 TFAP2CQ92754 450 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 NARS2Q96I59 477 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 TMEM246Q9BRR3 403 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 ERVK-6Q9BXR3 956 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 INTS7Q9NVH2 962 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 MYO10Q9HD67 2058 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 A0A1W2PP18 115 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 BCAS1O75363 584 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 GOT2P00505 430 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 OXTRP30559 389 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 SCNN1GP51170 649 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 KLHL12Q53G59 568 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 RNASE12Q5GAN4 147 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 RNF219Q5W0B1 726 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 BORAQ6PGQ7 559 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 ANKRD13BQ86YJ7 626 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 SLC13A3Q8WWT9 602 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 SERPINB11Q96P15 392 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 CYP2S1Q96SQ9 504 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 OLAHQ9NV23 265 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 SMPD4Q9NXE4 827 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 ING3Q9NXR8 418 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 ZNF490Q9ULM2 529 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 KCTD3Q9Y597 815 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 PEX16Q9Y5Y5 336 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 SMIM28A0A1B0GU29 152 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 IQCF5A8MTL0 148 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 FGF10O15520 208 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 PIGRP01833 764 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 MBL2P11226 248 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 PBLDP30039 288 aaPredicted RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 GNPDA1P46926 289 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 EEFSECP57772 596 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 IRF8Q02556 426 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 KRT74Q7RTS7 529 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 LPPQ93052 612 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 TLR8Q9NR97 1041 aaKnown RBP12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 ZNF224Q9NZL3 707 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 ERVK-18Q9QC07 812 aa12.39□□□□□ -0.43
SSX2IP-201ENST00000342203 KPNA5O15131 536 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 PGK1P00558 417 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 GPC1P35052 558 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 RFC2P35250 354 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 PLA2G16P53816 162 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 MBTD1Q05BQ5 628 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 KRT33BQ14525 404 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 DUS1LQ6P1R4 473 aaKnown RBP12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 CCBE1Q6UXH8 406 aaPredicted RBP12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 Q6ZNX1 250 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 ANKFN1Q8N957 763 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 Q8N9G6 341 aaPredicted RBP12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 GPR20Q99678 358 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 TM6SF2Q9BZW4 377 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 NKIRAS2Q9NYR9 191 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 ARVCFO00192 962 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 ARIH2O95376 493 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 C8BP07358 591 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 MYF6P23409 242 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 RXRBP28702 533 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 KCNJ8Q15842 424 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 CATSPERGQ6ZRH7 1159 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 SLC35F5Q8WV83 523 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 MYLPFQ96A32 169 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 TTYH2Q9BSA4 534 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 GMIPQ9P107 970 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 SSR3Q9UNL2 185 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 A0A1W2PQ67 120 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
SSX2IP-201ENST00000342203 SUV39H1O43463 412 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms