RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 FAM83EQ2M2I3 478 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 HECTD3Q5T447 861 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 IL31Q6EBC2 164 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 CLEC6AQ6EIG7 209 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 BPIFB6Q8NFQ5 453 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 OR7D4Q8NG98 312 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF641Q96N77 438 aaPredicted RBP18.58■□□□□ 0.57
PSPC1-201ENST00000338910 SPON2Q9BUD6 331 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 NDUFAF1Q9Y375 327 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 KCTD3Q9Y597 815 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 UBFD1O14562 309 aaKnown RBP18.58■□□□□ 0.56
PSPC1-201ENST00000338910 KLKB1P03952 638 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 HMGA1P17096 107 aaKnown RBP18.58■□□□□ 0.56
PSPC1-201ENST00000338910 CAPN3P20807 821 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 PLK1P53350 603 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 CSHL1Q14406 222 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 ZNF235Q14590 738 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 CYP51A1Q16850 503 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 SFRP1Q8N474 314 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 OR6P1Q8NGX9 317 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 TRIM43Q96BQ3 446 aaPredicted RBP18.58■□□□□ 0.56
PSPC1-201ENST00000338910 C3orf30Q96M34 536 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 SPATA7Q9P0W8 599 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 AFF4Q9UHB7 1163 aaKnown RBP18.58■□□□□ 0.56
PSPC1-201ENST00000338910 ZNF639Q9UID6 485 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 DAPK2Q9UIK4 370 aa18.58■□□□□ 0.56
PSPC1-201ENST00000338910 ZFC3H1O60293 1989 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 ABHD14A-ACY1A0A1B0GW23 586 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 H0YAE9 185 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 ACRP10323 421 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 ELK4P28324 431 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 OPRL1P41146 370 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 SLC11A2P49281 568 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 CBX2Q14781 532 aaPredicted RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 TAF12Q16514 161 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 VPS26BQ4G0F5 336 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 BTLAQ7Z6A9 289 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 LDB1Q86U70 411 aaPredicted RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 ABHD11Q8NFV4 315 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 OR13J1Q8NGT2 312 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 AUTS2Q8WXX7 1259 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 ZNF558Q96NG5 402 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 POLR1EQ9GZS1 481 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 LHPPQ9H008 270 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 RAD21L1Q9H4I0 556 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 GSTO2Q9H4Y5 243 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 INTS10Q9NVR2 710 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 TSC22D4Q9Y3Q8 395 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 TCRBV5S2A0A599 114 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 ABLIM3O94929 683 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 IRF1P10914 325 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 EEF1B2P24534 225 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 CAPRIN1Q14444 709 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 UGT3A2Q3SY77 523 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 BROXQ5VW32 411 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 FRA10AC1Q70Z53 315 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 CCDC80Q76M96 950 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 SLC39A11Q8N1S5 342 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 PAPD5Q8NDF8 572 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 C19orf60Q96EN9 201 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 CCDC138Q96M89 665 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 CDK5RAP1Q96SZ6 601 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 PSD2Q9BQI7 771 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 RNF38Q9H0F5 515 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 C11orf49Q9H6J7 331 aa18.57■□□□□ 0.56
PSPC1-201ENST00000338910 RC3H2Q9HBD1 1191 aaKnown RBP18.57■□□□□ 0.56
PSPC1-201ENST00000338910 H0Y858 1186 aa18.56■□□□□ 0.56
PSPC1-201ENST00000338910 INPP4BO15327 924 aa18.56■□□□□ 0.56
PSPC1-201ENST00000338910 OXSR1O95747 527 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-201ENST00000338910 ATXN1LP0C7T5 689 aaKnown RBP18.56■□□□□ 0.56
PSPC1-201ENST00000338910 ARSDP51689 593 aa18.56■□□□□ 0.56
PSPC1-201ENST00000338910 RBM20Q5T481 1227 aaKnown RBP18.56■□□□□ 0.56
PSPC1-201ENST00000338910 TMCO5AQ8N6Q1 288 aa18.56■□□□□ 0.56
PSPC1-201ENST00000338910 SH3YL1Q96HL8 342 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-201ENST00000338910 TLR9Q9NR96 1032 aa18.56■□□□□ 0.56
PSPC1-201ENST00000338910 LOC285095A0A1B0GVY8 99 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 OR51F1A6NGY5 319 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 SCAMP3O14828 347 aaKnown RBP18.55■□□□□ 0.56
PSPC1-201ENST00000338910 SYNCRIPO60506 623 aaKnown RBP18.55■□□□□ 0.56
PSPC1-201ENST00000338910 TSPAN3O60637 253 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 TIMP1P01033 207 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 PIRTP0C851 137 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 MTHFD1P11586 935 aaKnown RBP18.55■□□□□ 0.56
PSPC1-201ENST00000338910 SGSHP51688 502 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 SLC12A2P55011 1212 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 WDR5P61964 334 aaKnown RBP18.55■□□□□ 0.56
PSPC1-201ENST00000338910 POU4F1Q01851 419 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 GALNT3Q14435 633 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 PTPRCAPQ14761 206 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 KIF19Q2TAC6 998 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 CADM3Q8N126 398 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 PDZD8Q8NEN9 1154 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 BLOC1S5Q8TDH9 187 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 TADA1Q96BN2 335 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 PHF21BQ96EK2 531 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 NRBF2Q96F24 287 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 AKTIPQ9H8T0 292 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 TRPM5Q9NZQ8 1165 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 C2orf78A6NCI8 922 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms