RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RGS5O15539 181 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 FGF1P05230 155 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 STK19P49842 368 aaPredicted RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 SEMA3AQ14563 771 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 FAM98BQ52LJ0 330 aaKnown RBP8.14□□□□□ -1.11
HPS4-201ENST00000336873 PIGGQ5H8A4 983 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 PAGE3Q5JUK9 113 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 SERPINA9Q86WD7 417 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 P3H2Q8IVL5 708 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 KRTCAP2Q8N6L1 136 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 C7orf57Q8NEG2 295 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 SLC30A3Q99726 388 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 TTPALQ9BTX7 342 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 MTG2Q9H4K7 406 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 TMEM161AQ9NX61 479 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 TRIM17Q9Y577 477 aa8.14□□□□□ -1.11
HPS4-201ENST00000336873 RAD51BO15315 384 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ACSL4O60488 711 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 DEAF1O75398 565 aaPredicted RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 WDR47O94967 919 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 C1QAP02745 245 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 OPN1SWP03999 348 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ZNF182P17025 639 aaPredicted RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 NAA20P61599 178 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 MSANTD2Q6P1R3 559 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 TMEM207Q6UWW9 146 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 GET4Q7L5D6 327 aaPredicted RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 ADCK1Q86TW2 530 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 OR2T12Q8NG77 320 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 OR13J1Q8NGT2 312 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ASB9Q96DX5 294 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 TEX37Q96LM6 180 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 HAPLN3Q96S86 360 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 YME1L1Q96TA2 773 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 CXorf21Q9HAI6 301 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 CLK4Q9HAZ1 481 aaKnown RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 CTPS2Q9NRF8 586 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 TSC22D4Q9Y3Q8 395 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 A0A0G2JN53 185 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 NME4O00746 187 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 PRMT5O14744 637 aaPredicted RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 TMCC1O94876 653 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ALDOCP09972 364 aaKnown RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 HLA-DPA1P20036 260 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 PCSK6P29122 969 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ENTPD1P49961 510 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ZXDBP98169 803 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 RHDQ02161 417 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 DMPKQ09013 629 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ALKAL1Q6UXT8 129 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 PRR23BQ6ZRT6 265 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 TRMT11Q7Z4G4 463 aaKnown RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 HMGN2P46Q86SG4 172 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 SNX29P2Q8IUI4 249 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 SLC15A3Q8IY34 581 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 DLG3Q92796 817 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 RTP3Q9BQQ7 232 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ASPSCR1Q9BZE9 553 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 LSM7Q9UK45 103 aaKnown RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 COMMD3-BMI1R4GMX3 469 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 COL11A2P13942 1736 aaPredicted RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 RP1P56715 2156 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 TMX2-CTNND1H3BSU7 103 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 SEPT4O43236 478 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 SLC7A4O43246 635 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 BCAS2O75934 225 aaPredicted RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 ATP5BP06576 529 aaKnown RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 ACRP10323 421 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 CKBP12277 381 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 PTNP21246 168 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 S100A3P33764 101 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ACLYP53396 1101 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 IRF8Q02556 426 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 SPANXN4Q5MJ08 99 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 DENND5AQ6IQ26 1287 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 CMTM8Q8IZV2 173 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 TAGAPQ8N103 731 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 OR4F6Q8NGB9 312 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 GIPC3Q8TF64 312 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 MRPS31Q92665 395 aaKnown RBP8.13□□□□□ -1.11
HPS4-201ENST00000336873 SCAMP4Q969E2 229 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 PANX1Q96RD7 426 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 C9orf16Q9BUW7 83 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 MIR1-1HGQ9H1L0 117 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 CRISPLD1Q9H336 500 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 SMOC2Q9H3U7 446 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 OSGEPL1Q9H4B0 414 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 FANCEQ9HB96 536 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 EBF1Q9UH73 591 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 TLR6Q9Y2C9 796 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 ZNF451Q9Y4E5 1061 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 PCDHGA7Q9Y5G6 932 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 CPQQ9Y646 472 aa8.13□□□□□ -1.11
HPS4-201ENST00000336873 LRRC37AA6NMS7 1700 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 MBLAC1A4D2B0 266 aaPredicted RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 ANKRD66B4E2M5 251 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms