RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 AP2B1P63010 937 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 GRIN2CQ14957 1233 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 SH2D4BQ5SQS7 431 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 SERPINA13PQ6UXR4 307 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 APLFQ8IW19 511 aaPredicted RBP20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 UCMAQ8WVF2 138 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 PDLIM5Q96HC4 596 aaKnown RBP20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 FAM129BQ96TA1 746 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 COPS8Q99627 209 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 FAM83DQ9H4H8 585 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 MUC22E2RYF6 1773 aaPredicted RBP20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 MEI4A8MW99 385 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 SUPT3HB4E1H0 165 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 SUPT3HO75486 399 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 SNUPNO95149 360 aaKnown RBP20■□□□□ 0.79
RIPPLY3-201ENST00000329553 GFAPP14136 432 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 TSPAN8P19075 237 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 NFKBIAP25963 317 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 TMEM154Q6P9G4 183 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 TMIEQ8NEW7 156 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 PIP4K2CQ8TBX8 421 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 OR8D1Q8WZ84 308 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 PPP1R36Q96LQ0 422 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 NUF2Q9BZD4 464 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 CLDND1Q9NY35 253 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 VTI1BQ9UEU0 232 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 ITM2BQ9Y287 266 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 UNC80Q8N2C7 3258 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 ANKRD12Q6UB98 2062 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 SLCO1B7G3V0H7 640 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 UBFD1O14562 309 aaKnown RBP20■□□□□ 0.79
RIPPLY3-201ENST00000329553 KAT7O95251 611 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 JUNP05412 331 aaKnown RBP20■□□□□ 0.79
RIPPLY3-201ENST00000329553 MMP12P39900 470 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 IL12RB1P42701 662 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 CDH13P55290 713 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 SLC25A3Q00325 362 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 GALNT1Q10472 559 aaPredicted RBP20■□□□□ 0.79
RIPPLY3-201ENST00000329553 CUZD1Q86UP6 607 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 ARRDC3Q96B67 414 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 ULK4Q96C45 1275 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 RIPOR3Q96MK2 946 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 OR52B2Q96RD2 323 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 ACOX2Q99424 681 aa20■□□□□ 0.79
RIPPLY3-201ENST00000329553 WDR55Q9H6Y2 383 aaPredicted RBP20■□□□□ 0.79
RIPPLY3-201ENST00000329553 EML4Q9HC35 981 aaKnown RBP20■□□□□ 0.79
RIPPLY3-201ENST00000329553 TSR3Q9UJK0 312 aaKnown RBP20■□□□□ 0.79
RIPPLY3-201ENST00000329553 IGLV3-16A0A075B6K0 115 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 SYCE1LA8MT33 242 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 LTBRP36941 435 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 HK3P52790 923 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 COPAP53621 1224 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 ELAVL3Q14576 367 aaKnown RBP19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 GPRC6AQ5T6X5 926 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 LIPIQ6XZB0 460 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 RAB44Q7Z6P3 723 aaPredicted RBP19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 FBXO39Q8N4B4 442 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 TRMT61BQ9BVS5 477 aaKnown RBP19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 FBRSL1Q9HCM7 1045 aaKnown RBP19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 GOLGA8QA0A0J9YX86 632 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 GOLGA8OA6NCC3 632 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 GOLGA8NF8WBI6 632 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 CCNT2O60583 730 aaKnown RBP19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 FKBP6O75344 327 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 BTKQ06187 659 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 FBXO48Q5FWF7 155 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 ERAP2Q6P179 960 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 AAGABQ6PD74 315 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 TECPR1Q7Z6L1 1165 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 ERLEC1Q96DZ1 483 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 TRMOQ9BU70 441 aa19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 THAP10Q9P2Z0 257 aaPredicted RBP19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 MBD1Q9UIS9 605 aaPredicted RBP19.99■□□□□ 0.79
RIPPLY3-201ENST00000329553 NCF1BA6NI72 391 aaPredicted RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 NCF1CA8MVU1 366 aaPredicted RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 NEMP1O14524 444 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 NCF1P14598 390 aaPredicted RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 EPHA3P29320 983 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 DCDC1P59894 354 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 PDCD2Q16342 344 aaPredicted RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 ITPRIPL2Q3MIP1 535 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 PGM2L1Q6PCE3 622 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 GPSM1Q86YR5 675 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 POU5F2Q8N7G0 328 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 SUSD6Q92537 303 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 RIOK2Q9BVS4 552 aaKnown RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 ARNTLO00327 626 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 PLK4O00444 970 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 PPP6CO00743 305 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 SPINT1O43278 529 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 KLK8O60259 260 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 ITGB7P26010 798 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 EIF2DP41214 584 aaKnown RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 HENMT1Q5T8I9 393 aaKnown RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 EGFLAMQ63HQ2 1017 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 ADGRG6Q86SQ4 1221 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 ZBTB2Q8N680 514 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 GATA6Q92908 595 aa19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 NSUN5Q96P11 429 aaKnown RBP19.98■□□□□ 0.79
RIPPLY3-201ENST00000329553 VCXQ9H320 206 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms