RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DPTQ07507 201 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 HTR4Q13639 388 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 ACOX1Q15067 660 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 LSM12Q3MHD2 195 aaKnown RBP17.58■□□□□ 0.4
RAB39A-201ENST00000320578 ACSBG2Q5FVE4 666 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 NAIF1Q69YI7 327 aaPredicted RBP17.58■□□□□ 0.4
RAB39A-201ENST00000320578 NEK10Q6ZWH5 1172 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 ST13P5Q8NFI4 369 aaPredicted RBP17.58■□□□□ 0.4
RAB39A-201ENST00000320578 CEP70Q8NHQ1 597 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 KCNV2Q8TDN2 545 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 OR52B2Q96RD2 323 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 BTBD10Q9BSF8 475 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 EPHX3Q9H6B9 360 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 TRPV5Q9NQA5 729 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 CD274Q9NZQ7 290 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 PLXNA2O75051 1894 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 GOLGA8QA0A0J9YX86 632 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 GOLGA8OA6NCC3 632 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 PRR5-ARHGAP8B1AHC4 643 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 GOLGA8NF8WBI6 632 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 SDHDO14521 159 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 SIX3O95343 332 aaPredicted RBP17.57■□□□□ 0.4
RAB39A-201ENST00000320578 EPHX1P07099 455 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 MSH3P20585 1137 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 KCNJ2P63252 427 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 SH3BP2P78314 561 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 ARHGAP8P85298 464 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 CAMK2GQ13555 558 aaPredicted RBP17.57■□□□□ 0.4
RAB39A-201ENST00000320578 UGT3A2Q3SY77 523 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 EGFLAMQ63HQ2 1017 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 FRA10AC1Q70Z53 315 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 GLYATL1Q969I3 302 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 AP2M1Q96CW1 435 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 RPP25Q9BUL9 199 aaKnown RBP17.57■□□□□ 0.4
RAB39A-201ENST00000320578 SHCBP1LQ9BZQ2 653 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 C1orf21Q9H246 121 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 PCTPQ9UKL6 214 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 STON1Q9Y6Q2 735 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 PLXNB3Q9ULL4 1909 aa17.57■□□□□ 0.4
RAB39A-201ENST00000320578 FADS2P1A8MWK0 482 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 FTH1P02794 183 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 S100BP04271 92 aaPredicted RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 ENO2P09104 434 aaPredicted RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 AKT1P31749 480 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 CCR7P32248 378 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 BTKQ06187 659 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 UBAP2LQ14157 1087 aaKnown RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 EFL1Q7Z2Z2 1120 aaKnown RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 OR56A4Q8NGH8 313 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 AGAP11Q8TF27 550 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 CMTM5Q96DZ9 223 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 ZNF385DQ9H6B1 395 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 WDR55Q9H6Y2 383 aaPredicted RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 PTBP2Q9UKA9 531 aaKnown RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 SPECC1L-ADORA2AF8WAN1 911 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 AZIN1O14977 448 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 SLC16A5O15375 505 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 FFAR2O15552 330 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 AP1G1O43747 822 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 ITGB6P18564 788 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 NCF2P19878 526 aaPredicted RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 EPHA3P29320 983 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 GALK1P51570 392 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 IRX1P78414 480 aaPredicted RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 CDKL1Q00532 357 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 PDCD2Q16342 344 aaPredicted RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 POM121L1PQ3SYA9 428 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 KANK2Q63ZY3 851 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 SULT1C3Q6IMI6 304 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 CHSY3Q70JA7 882 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 TMPRSS6Q8IU80 811 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 KIF2BQ8N4N8 673 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 UBTD2Q8WUN7 234 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 P2RY13Q9BPV8 354 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 TBC1D10AQ9BXI6 508 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 NUSAP1Q9BXS6 441 aaKnown RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 RSPH9Q9H1X1 276 aaPredicted RBP17.56■□□□□ 0.4
RAB39A-201ENST00000320578 RASSF4Q9H2L5 321 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 TNFRSF12AQ9NP84 129 aa17.56■□□□□ 0.4
RAB39A-201ENST00000320578 TMEM233B4DJY2 109 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 E9PBE3 544 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 SGTAO43765 313 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 KLHL41O60662 606 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 ENO1P06733 434 aaKnown RBP17.55■□□□□ 0.4
RAB39A-201ENST00000320578 C8GP07360 202 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 VCLP18206 1134 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 METAP1P53582 386 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 CDH13P55290 713 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 PKNOX1P55347 436 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 ELF3P78545 371 aaPredicted RBP17.55■□□□□ 0.4
RAB39A-201ENST00000320578 SP140Q13342 867 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 RPS27LQ71UM5 84 aaKnown RBP17.55■□□□□ 0.4
RAB39A-201ENST00000320578 MMAAQ8IVH4 418 aaKnown RBP17.55■□□□□ 0.4
RAB39A-201ENST00000320578 TRPC4APQ8TEL6 797 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 ZNF382Q96SR6 550 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 ACOX2Q99424 681 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 CCT7Q99832 543 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 FBRSQ9HAH7 460 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms