RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PRDM5Q9NQX1 630 aaPredicted RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 ZIM2Q9NZV7 527 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 MAGEL2Q9UJ55 1249 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 POU2F3Q9UKI9 436 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 PCTPQ9UKL6 214 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 HAS3O00219 553 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 PDHXO00330 501 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 TULP3O75386 442 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 CHEK2O96017 543 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 RAP2AP10114 183 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 FMO4P31512 558 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 MTHFRP42898 656 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 IST1P53990 364 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 SKIV2LQ15477 1246 aaKnown RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 PHKG1Q16816 387 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 DEPDC1Q5TB30 811 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 CRTC3Q6UUV7 619 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 AGMOQ6ZNB7 445 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 SLC16A12Q6ZSM3 486 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 ZFAND4Q86XD8 727 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 C8orf59Q8N0T1 100 aaPredicted RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 ARL10Q8N8L6 244 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 FNDC5Q8NAU1 212 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 ITFG1Q8TB96 612 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 ZFP90Q8TF47 636 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 SEMA3CQ99985 751 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 HGH1Q9BTY7 390 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 KLHL25Q9H0H3 589 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 SYTL2Q9HCH5 934 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 ASB1Q9Y576 335 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 LCHNA4D1U4 455 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 NPPAP01160 153 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 RHOQP17081 205 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 HTR1BP28222 390 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 RPL9P32969 192 aaKnown RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 GRIK1P39086 918 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 PRKG2Q13237 762 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 GRB14Q14449 540 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 MEP1AQ16819 746 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 IMPG1Q17R60 797 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 METTL23Q86XA0 190 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 DPP10Q8N608 796 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 FAM86B1Q8N7N1 296 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 ZNF641Q96N77 438 aaPredicted RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 ZYG11BQ9C0D3 744 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 CARS2Q9HA77 564 aaKnown RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 SMURF2Q9HAU4 748 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 POLE4Q9NR33 117 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 TMEM248Q9NWD8 314 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 FAM118AQ9NWS6 357 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 ST3GAL5Q9UNP4 418 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 NPEPPSL1A6NEC2 478 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 MUSKO15146 869 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 OGNP20774 298 aaKnown RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 CACNB2Q08289 660 aaPredicted RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 RBBP7Q16576 425 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 AAK1Q2M2I8 961 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 DPY19L1Q2PZI1 675 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 TYSND1Q2T9J0 566 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 PLA2G4EQ3MJ16 856 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 MS4A13Q5J8X5 152 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 Q6ZSR9 355 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 TLK2Q86UE8 772 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 ZDHHC13Q8IUH4 622 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 BRSK1Q8TDC3 778 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 GTF3C2Q8WUA4 911 aaPredicted RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 HDAC2Q92769 488 aaKnown RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 AURKBQ96GD4 344 aaPredicted RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 SERPINB11Q96P15 392 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 C1QTNF3Q9BXJ4 246 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 AMBRA1Q9C0C7 1298 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 TAS2R13Q9NYV9 303 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 KLQ9UEF7 1012 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 G3V2T6 193 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 BTN3A1O00481 513 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 PIGAP37287 484 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 RAD51Q06609 339 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 CTU2Q2VPK5 515 aaKnown RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 FAM98BQ52LJ0 330 aaKnown RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 C6orf141Q5SZD1 244 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 ANKRD34AQ69YU3 496 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 CD300LGQ6UXG3 332 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 HS3ST5Q8IZT8 346 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 CDYL2Q8N8U2 506 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 CHDHQ8NE62 594 aaPredicted RBP13.28□□□□□ -0.28
SKA3-202ENST00000314759 PEX13Q92968 403 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 SLC39A13Q96H72 371 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 CDKN2AIPNLQ96HQ2 116 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 CDK15Q96Q40 435 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 MBOAT4Q96T53 435 aa13.28□□□□□ -0.28
SKA3-202ENST00000314759 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 STX16O14662 325 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 KLK8O60259 260 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 NOBOXO60393 691 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 MAN1A2O60476 641 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 OR4F21O95013 312 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 MLYCDO95822 493 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms