RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CLCQ05315 142 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 PDCD2Q16342 344 aaPredicted RBP16.48■□□□□ 0.23
CLCF1-201ENST00000312438 LSM12Q3MHD2 195 aaKnown RBP16.48■□□□□ 0.23
CLCF1-201ENST00000312438 SBSNQ6UWP8 590 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 ZNF513Q8N8E2 541 aaPredicted RBP16.48■□□□□ 0.23
CLCF1-201ENST00000312438 GLYATL1Q969I3 302 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 MAELQ96JY0 434 aaKnown RBP16.48■□□□□ 0.23
CLCF1-201ENST00000312438 OR52B2Q96RD2 323 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 ZDHHC4Q9NPG8 344 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 TAGLN3Q9UI15 199 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 OARD1Q9Y530 152 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 TNPO3Q9Y5L0 923 aaKnown RBP16.48■□□□□ 0.23
CLCF1-201ENST00000312438 CDH23Q9H251 3354 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 GOLGA8QA0A0J9YX86 632 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 GOLGA8OA6NCC3 632 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 LRRC14BA6NHZ5 514 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 PRR5-ARHGAP8B1AHC4 643 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 GOLGA8NF8WBI6 632 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 RNASEH1O60930 286 aaKnown RBP16.47■□□□□ 0.23
CLCF1-201ENST00000312438 CDK14O94921 469 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 TSPAN8P19075 237 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 KCNJ2P63252 427 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 ARHGAP8P85298 464 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 UBAP2LQ14157 1087 aaKnown RBP16.47■□□□□ 0.23
CLCF1-201ENST00000312438 ZNF765Q7L2R6 523 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 DET1Q7L5Y6 550 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 KIF2BQ8N4N8 673 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 TRPC4APQ8TEL6 797 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 TNFRSF12AQ9NP84 129 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 MID1IP1Q9NPA3 183 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 UTP6Q9NYH9 597 aaKnown RBP16.47■□□□□ 0.23
CLCF1-201ENST00000312438 E9PBE3 544 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 K7EQS6 105 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 FFAR2O15552 330 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 LZTS3O60299 673 aaPredicted RBP16.47■□□□□ 0.23
CLCF1-201ENST00000312438 KLHL41O60662 606 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 MTX2O75431 263 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 RECQL5O94762 991 aaPredicted RBP16.47■□□□□ 0.23
CLCF1-201ENST00000312438 MLYCDO95822 493 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 S100BP04271 92 aaPredicted RBP16.47■□□□□ 0.23
CLCF1-201ENST00000312438 P2RY2P41231 377 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 PSMD8P48556 350 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 SATB1Q01826 763 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 LCP2Q13094 533 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 PPP1R3AQ16821 1122 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 NLRP8Q86W28 1048 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 CEP70Q8NHQ1 597 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 PPP1R36Q96LQ0 422 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 NSUN5Q96P11 429 aaKnown RBP16.47■□□□□ 0.23
CLCF1-201ENST00000312438 RDH14Q9HBH5 336 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 CD207Q9UJ71 328 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 FIS1Q9Y3D6 152 aa16.47■□□□□ 0.23
CLCF1-201ENST00000312438 PLK4O00444 970 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 SYNCRIPO60506 623 aaKnown RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 MMP20O60882 483 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 FTH1P02794 183 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 JUNP05412 331 aaKnown RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 ENO1P06733 434 aaKnown RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 C6P13671 934 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 IGFBP4P22692 258 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 KIR2DL1P43626 348 aaPredicted RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 BTKQ06187 659 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 CAMK2GQ13555 558 aaPredicted RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 ADGRE1Q14246 886 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 PCBP2Q15366 365 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 LRIT3Q3SXY7 679 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 PLEKHS1Q5SXH7 462 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 CXorf40AQ8TE69 158 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 ZNF483Q8TF39 744 aaPredicted RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 RAB3IPQ96QF0 476 aaPredicted RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 BTBD10Q9BSF8 475 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 RSPH9Q9H1X1 276 aaPredicted RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 TTYH1Q9H313 450 aaPredicted RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 MEAF6Q9HAF1 191 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 SLC40A1Q9NP59 571 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 MBD1Q9UIS9 605 aaPredicted RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 TSR3Q9UJK0 312 aaKnown RBP16.46■□□□□ 0.23
CLCF1-201ENST00000312438 PCTPQ9UKL6 214 aa16.46■□□□□ 0.23
CLCF1-201ENST00000312438 KIF26AQ9ULI4 1882 aaPredicted RBP16.46■□□□□ 0.22
CLCF1-201ENST00000312438 TMEM265A0A087WTH1 108 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 PPP6CO00743 305 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 VCLP18206 1134 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 WASP42768 502 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 AGTR2P50052 363 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 INHBCP55103 352 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 DPTQ07507 201 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 HSPA14Q0VDF9 509 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 CNTN1Q12860 1018 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 TMEM115Q12893 351 aaPredicted RBP16.45■□□□□ 0.22
CLCF1-201ENST00000312438 GBX1Q14549 363 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 AAK1Q2M2I8 961 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 UGT3A2Q3SY77 523 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 NXNQ6DKJ4 435 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 PDPRQ8NCN5 879 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 OR56A4Q8NGH8 313 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 ACTRT2Q8TDY3 377 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 NUS1Q96E22 293 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 HGH1Q9BTY7 390 aa16.45■□□□□ 0.22
CLCF1-201ENST00000312438 SEMA4BQ9NPR2 832 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms