RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TDP1Q9NUW8 608 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 THAP1Q9NVV9 213 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 NMRK1Q9NWW6 199 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DTLQ9NZJ0 730 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 NDUFA13Q9P0J0 144 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SLC17A7Q9P2U7 560 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TAGLN3Q9UI15 199 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 KLK13Q9UKR3 277 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SLC8A2Q9UPR5 921 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 EMC9Q9Y3B6 208 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TTLL3Q9Y4R7 772 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 WNT6Q9Y6F9 365 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 PIEZO2Q9H5I5 2752 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 FAM170AA1A519 330 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 B2RBV5 119 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TRIM49D1C9J1S8 452 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CAPN9O14815 690 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SCAMP3O14828 347 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 HGSO14964 777 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 MDM4O15151 490 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 FOXS1O43638 330 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PEX1O43933 1283 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CCNT2O60583 730 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SMIM24O75264 130 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 GCATO75600 419 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 RFPL1O75677 317 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SNUPNO95149 360 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 APBB3O95704 486 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 FGF19O95750 216 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 APOEP02649 317 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 BPGMP07738 259 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ODC1P11926 461 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CCDC130P13994 396 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 GPD1P21695 349 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 DRD1P21728 446 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 BGNP21810 368 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ACAT1P24752 427 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CYP2F1P24903 491 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 GRK2P25098 689 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 IL1R2P27930 398 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CRABP2P29373 138 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 MIPP30301 263 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PTGER3P43115 390 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 GIPRP48546 466 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 NR2C2P49116 596 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TUFMP49411 452 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PAPOLAP51003 745 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 DGKEP52429 567 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 YWHAGP61981 247 aaKnown RBP eCLIP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 YWHAZP63104 245 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 BASP1P80723 227 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SARNPP82979 210 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 OVGP1Q12889 678 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 NFATC3Q12968 1075 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 FRG1Q14331 258 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM132DQ14C87 1099 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 LSM12Q3MHD2 195 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 KBTBD12Q3ZCT8 623 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SV2CQ496J9 727 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 USP39Q53GS9 565 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TEX44Q53QW1 395 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF667Q5HYK9 610 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 STEAP4Q687X5 459 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SLC9A4Q6AI14 798 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM154Q6P9G4 183 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 RFWD3Q6PCD5 774 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 DARS2Q6PI48 645 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 RINLQ6ZS11 566 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 MARK2Q7KZI7 788 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PIP4P1Q86T03 277 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ITIH5Q86UX2 942 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 RASSF3Q86WH2 238 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ZDHHC17Q8IUH5 632 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM126BQ8IUX1 230 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 NUDCD3Q8IVD9 361 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CDKL3Q8IVW4 592 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 WDR75Q8IWA0 830 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SCUBE1Q8IWY4 988 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CCDC33Q8N5R6 958 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ARL14EPQ8N8R7 260 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 FAM71DQ8N9W8 422 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 MDGA1Q8NFP4 955 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 JOSD2Q8TAC2 188 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SPATA18Q8TC71 538 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 OSCP1Q8WVF1 389 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 BTN2A2Q8WVV5 523 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 RLN3Q8WXF3 142 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TFAP2BQ92481 460 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 NCSTNQ92542 709 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PTPRN2Q92932 1015 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TTC17Q96AE7 1141 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 FAF2Q96CS3 445 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 DTNBP1Q96EV8 351 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SERAC1Q96JX3 654 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 GNRHR2Q96P88 292 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 RNF157Q96PX1 679 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 FAM111AQ96PZ2 611 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ADOQ96SZ5 270 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms