RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 MALT1Q9UDY8 824 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 MANSC4A6NHS7 340 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 FFAR2O15552 330 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 TRMUO75648 421 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 UBXN7O94888 489 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 VNN2O95498 520 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RENP00797 406 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 DCKP27707 260 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 ADORA2AP29274 412 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RPL22P35268 128 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 POLR2JP52435 117 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 GRM3Q14832 879 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 PTPN20Q4JDL3 420 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 PSRC1Q6PGN9 363 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 HSDL2Q6YN16 418 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 P2RY8Q86VZ1 359 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 AENQ8WTP8 325 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 UFD1Q92890 307 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RELTQ969Z4 430 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 ZBTB45Q96K62 511 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 CALML5Q9NZT1 146 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 WASF3Q9UPY6 502 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 TNS3Q68CZ2 1445 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 MROH1Q8NDA8 1641 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 FABP12A6NFH5 140 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 NEDD8-MDP1E9PL57 170 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 LIASO43766 372 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 COL6A1P12109 1028 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RPS9P46781 194 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RPP38P78345 283 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 CRTC2Q53ET0 693 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 MSANTD2Q6P1R3 559 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 ECHDC2Q86YB7 292 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 PQLC1Q8N2U9 271 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 ZSCAN4Q8NAM6 433 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 OR6K2Q8NGY2 324 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 IFT27Q9BW83 186 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 KCTD5Q9NXV2 234 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 KIAA1522Q9P206 1035 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 SLC27A5Q9Y2P5 690 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RHPN2P1A8MT19 583 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 NME6O75414 186 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 APODP05090 189 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 GNAO1P09471 354 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 S100A10P60903 97 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 SULT2A1Q06520 285 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 TARBP2Q15633 366 aaKnown RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RAB12Q6IQ22 244 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 HFE2Q6ZVN8 426 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF34Q8IZ26 560 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 PDPRQ8NCN5 879 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 EMID1Q96A84 441 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-201ENST00000302528 RIPOR3Q96MK2 946 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF570Q96NI8 536 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 PRDM12Q9H4Q4 367 aa10.29□□□□□ -0.76
CLIP1-201ENST00000302528 ELOVL7A1L3X0 281 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 MAP3K8P41279 467 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CCR10P46092 362 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 RNASEH2BQ5TBB1 312 aaKnown RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CRELD2Q6UXH1 353 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 GTPBP3Q969Y2 492 aaKnown RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 HSFY1Q96LI6 401 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 SCGB3A2Q96PL1 93 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 RNF157Q96PX1 679 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CIB1Q99828 191 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 EBNA1BP2Q99848 306 aaKnown RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 FBXW2Q9UKT8 454 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 PCDHGB1Q9Y5G3 927 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 BANF1O75531 89 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 SLC35G6P0C7Q6 338 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 SLC6A9P48067 706 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 KCNJ5P48544 419 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 RGS19P49795 217 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 MAPK12P53778 367 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 PPP4CP60510 307 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 BEX3Q00994 111 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CDK10Q15131 360 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 P4HA3Q7Z4N8 544 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 FAM13CQ8NE31 585 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 BLOC1S4Q9NUP1 217 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 PNPOQ9NVS9 261 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF510Q9Y2H8 683 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CEP170BQ9Y4F5 1589 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CABYRO75952 493 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 ANXA4P09525 319 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 PSKH1P11801 424 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 MSX2P35548 267 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 APLP1P51693 650 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 PRR5P85299 388 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 USP4Q13107 963 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 LPCAT4Q643R3 524 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CAND1Q86VP6 1230 aaKnown RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 GSTCDQ8NEC7 633 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 TRMOQ9BU70 441 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 TIMMDC1Q9NPL8 285 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 GRM6O15303 877 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CDH12P55289 794 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 TAS2R50P59544 299 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms