RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZBP1Q9H171 429 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 ZFYVE1Q9HBF4 777 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 CXXC1Q9P0U4 656 aaPredicted RBP21.67■■□□□ 1.06
TPM4-201ENST00000300933 EIF2B4Q9UI10 523 aaKnown RBP21.67■■□□□ 1.06
TPM4-201ENST00000300933 ZNF225Q9UK10 706 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 C7orf72A4D263 438 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 TRIM16O95361 564 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 HMGCLP35914 325 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 PLOD1Q02809 727 aaPredicted RBP21.66■■□□□ 1.06
TPM4-201ENST00000300933 SERPINA9Q86WD7 417 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 TMEM25Q86YD3 366 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 KREMEN2Q8NCW0 462 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 ATP6V1E2Q96A05 226 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 TRMOQ9BU70 441 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 ASB8Q9H765 288 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 POPDC3Q9HBV1 291 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 EPS15L1Q9UBC2 864 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 CRCPO75575 148 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 RPL10P27635 214 aaKnown RBP21.66■■□□□ 1.06
TPM4-201ENST00000300933 YBX1P67809 324 aaKnown RBP21.66■■□□□ 1.06
TPM4-201ENST00000300933 IL23RQ5VWK5 629 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 FUNDC1Q8IVP5 155 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 PGAM4Q8N0Y7 254 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 FNDC8Q8TC99 324 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 CIPCQ9C0C6 399 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 IL26Q9NPH9 171 aa21.66■■□□□ 1.06
TPM4-201ENST00000300933 GAPDHSO14556 408 aaPredicted RBP21.65■■□□□ 1.06
TPM4-201ENST00000300933 FOXD2O60548 495 aaPredicted RBP21.65■■□□□ 1.06
TPM4-201ENST00000300933 GUCA1CO95843 209 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 HLA-FP30511 346 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 GALNT1Q10472 559 aaPredicted RBP21.65■■□□□ 1.06
TPM4-201ENST00000300933 PLEKHG6Q3KR16 790 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 PLPP4Q5VZY2 271 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 REP15Q6BDI9 236 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 ST13P5Q8NFI4 369 aaPredicted RBP21.65■■□□□ 1.06
TPM4-201ENST00000300933 SLCO3A1Q9UIG8 710 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 PIKFYVEQ9Y2I7 2098 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 CTSAP10619 480 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 HOXB8P17481 243 aaPredicted RBP21.65■■□□□ 1.06
TPM4-201ENST00000300933 ME2P23368 584 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 DIO3P55073 304 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 CDH15P55291 814 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 CBX3Q13185 183 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 PTK2BQ14289 1009 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 RBBP7Q16576 425 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 ANKS6Q68DC2 871 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 ASTLQ6HA08 431 aaPredicted RBP21.65■■□□□ 1.06
TPM4-201ENST00000300933 BORAQ6PGQ7 559 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 ZNF783Q6ZMS7 281 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 SYVN1Q86TM6 617 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 GPSM1Q86YR5 675 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 ERI1Q8IV48 349 aaKnown RBP21.65■■□□□ 1.06
TPM4-201ENST00000300933 OR52B6Q8NGF0 335 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 CACNA2D2Q9NY47 1150 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 PCDHGA7Q9Y5G6 932 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 PCDHGA4Q9Y5G9 962 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 HCFC2Q9Y5Z7 792 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 COMMD10Q9Y6G5 202 aa21.65■■□□□ 1.06
TPM4-201ENST00000300933 OBSL1O75147 1896 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 PRSS51A0A1B0GVH4 220 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 ENTPD1P49961 510 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 CLCN7P51798 805 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 PSME3P61289 254 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 CREB5Q02930 508 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 SQLEQ14534 574 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 C16orf72Q14CZ0 275 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 ZNF697Q5TEC3 545 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 PTRHD1Q6GMV3 140 aaKnown RBP21.64■■□□□ 1.06
TPM4-201ENST00000300933 MYO1HQ8N1T3 1032 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 TMEM102Q8N9M5 508 aaPredicted RBP21.64■■□□□ 1.06
TPM4-201ENST00000300933 TCF25Q9BQ70 676 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 HGH1Q9BTY7 390 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 LINC00597Q9H2U6 94 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 COQ10BQ9H8M1 238 aa21.64■■□□□ 1.06
TPM4-201ENST00000300933 NR5A2O00482 541 aa21.64■■□□□ 1.05
TPM4-201ENST00000300933 HGFP14210 728 aa21.64■■□□□ 1.05
TPM4-201ENST00000300933 VPS26BQ4G0F5 336 aa21.64■■□□□ 1.05
TPM4-201ENST00000300933 NKAPQ8N5F7 415 aaKnown RBP21.64■■□□□ 1.05
TPM4-201ENST00000300933 HAUS8Q9BT25 410 aa21.64■■□□□ 1.05
TPM4-201ENST00000300933 SLC2A11Q9BYW1 496 aa21.64■■□□□ 1.05
TPM4-201ENST00000300933 MAGEE1Q9HCI5 957 aa21.64■■□□□ 1.05
TPM4-201ENST00000300933 POLG2Q9UHN1 485 aa21.64■■□□□ 1.05
TPM4-201ENST00000300933 TRAV19A0A0A6YYK7 116 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 A0A0J9YYE9 177 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 NPIPB15A6NHN6 443 aaPredicted RBP21.63■■□□□ 1.05
TPM4-201ENST00000300933 SNX2O60749 519 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 TRBC1P01850 177 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 SNRPB2P08579 225 aaKnown RBP21.63■■□□□ 1.05
TPM4-201ENST00000300933 TFPTP0C1Z6 253 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 ZNF26P17031 533 aaPredicted RBP21.63■■□□□ 1.05
TPM4-201ENST00000300933 BPIP17213 487 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 SOX11P35716 441 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 HSPA13P48723 471 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 ATP6V0D1P61421 351 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 CACNG1Q06432 222 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 SFSWAPQ12872 951 aaKnown RBP21.63■■□□□ 1.05
TPM4-201ENST00000300933 LCP2Q13094 533 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 HTR3DQ70Z44 454 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 GBF1Q92538 1859 aa21.63■■□□□ 1.05
TPM4-201ENST00000300933 LINC00271P0C7V0 271 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms