RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ATAD1Q8NBU5 361 aa15.42■□□□□ 0.06
UBAP1-201ENST00000297661 CALML6Q8TD86 181 aa15.42■□□□□ 0.06
UBAP1-201ENST00000297661 SEMA3CQ99985 751 aa15.42■□□□□ 0.06
UBAP1-201ENST00000297661 Q9Y3F1 56 aa15.42■□□□□ 0.06
UBAP1-201ENST00000297661 DNAJC15Q9Y5T4 150 aa15.42■□□□□ 0.06
UBAP1-201ENST00000297661 LDB2O43679 373 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 GOT2P00505 430 aaKnown RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 IMPDH1P20839 514 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 CLCQ05315 142 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 MAPK11Q15759 364 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 CARTPTQ16568 116 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 ZIK1Q3SY52 487 aaPredicted RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 ATAD3BQ5T9A4 648 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 LCN8Q6JVE9 175 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 FBXL22Q6P050 247 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 SLC16A12Q6ZSM3 486 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 SLCO6A1Q86UG4 719 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 SERINC5Q86VE9 423 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 SLC22A16Q86VW1 577 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 S100ZQ8WXG8 99 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 SERPINB11Q96P15 392 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 DGCR6LQ9BY27 220 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 CEP44Q9C0F1 390 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 ADNPQ9H2P0 1102 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 POLR3BQ9NW08 1133 aaPredicted RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■□□ 14.7
UBAP1-201ENST00000297661 NCF1BA6NI72 391 aaPredicted RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 NCF1CA8MVU1 366 aaPredicted RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 XYLBO75191 536 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 KRT75O95678 551 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 CHEK2O96017 543 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 LINC00032P0C843 101 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 NCF1P14598 390 aaPredicted RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 POLD3Q15054 466 aaPredicted RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 CYP51A1Q16850 503 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 LARP4Q71RC2 724 aaKnown RBP eCLIP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 MRPL10Q7Z7H8 261 aaKnown RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 ZCCHC7Q8N3Z6 543 aaKnown RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 AFAP1L2Q8N4X5 818 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 GABPB2Q8TAK5 448 aaPredicted RBP15.41■□□□□ 0.06
UBAP1-201ENST00000297661 ROPN1LQ96C74 230 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 TSPAN17Q96FV3 270 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 MAGED4Q96JG8 741 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 ZYG11BQ9C0D3 744 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 ATP13A1Q9HD20 1204 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 NOD1Q9Y239 953 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 FAM50BQ9Y247 325 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 TIMM22Q9Y584 194 aa15.41■□□□□ 0.06
UBAP1-201ENST00000297661 A0A0U1RQF3 1178 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 A0A0U1RQS6 177 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 EIF3FO00303 357 aaPredicted RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 PIP5K1BO14986 540 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ALBP02768 609 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ATXN1LP0C7T5 689 aaKnown RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 FCGR1AP12314 374 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 CES1P23141 567 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 GSTM2P28161 218 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 SHMT2P34897 504 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 RFC2P35250 354 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 NR4A2P43354 598 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 TIAL1Q01085 375 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 MGAT3Q09327 533 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 SCIMPQ6UWF3 145 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 SPARTQ8N0X7 666 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 CLIP4Q8N3C7 705 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 NAT16Q8N8M0 369 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 DCBLD1Q8N8Z6 715 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ARRDC2Q8TBH0 407 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 EXOC2Q96KP1 924 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 RPRD1AQ96P16 312 aaPredicted RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 CYP2S1Q96SQ9 504 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ACTR3BQ9P1U1 418 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 TMA7Q9Y2S6 64 aaKnown RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 UBA6A0AVT1 1052 aaPredicted RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ARPC2O15144 300 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 INPP4BO15327 924 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 CDK14O94921 469 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 MT-ND1P03886 318 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 SLC2A3P11169 496 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 GFAPP14136 432 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 DNAJB1P25685 340 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 HTR1BP28222 390 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 UGT3A1Q6NUS8 523 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 TBPL2Q6SJ96 375 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 R3HCC1LQ7Z5L2 792 aaKnown RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 CCDC117Q8IWD4 279 aaPredicted RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 MFSD4AQ8N468 514 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 PDZD8Q8NEN9 1154 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ESAMQ96AP7 390 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 CCDC126Q96EE4 140 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 SUSD3Q96L08 255 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 HOXD1Q9GZZ0 328 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ARNT2Q9HBZ2 717 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 TSR3Q9UJK0 312 aaKnown RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 ZNF229Q9UJW7 825 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 FNDC1Q4ZHG4 1894 aaPredicted RBP15.4■□□□□ 0.06
UBAP1-201ENST00000297661 MYO16Q9Y6X6 1858 aa15.4■□□□□ 0.06
UBAP1-201ENST00000297661 A0A0J9YYE9 177 aa15.39■□□□□ 0.05
UBAP1-201ENST00000297661 MROH6A6NGR9 719 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms