RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PTBP2Q9UKA9 531 aaKnown RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 ADAMTS6Q9UKP5 1117 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 PRPF19Q9UMS4 504 aaKnown RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 OARD1Q9Y530 152 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 ASB1Q9Y576 335 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 TIMM22Q9Y584 194 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 HEPACAM2A8MVW5 462 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 TAPBPO15533 448 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 FFAR2O15552 330 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 VPS4BO75351 444 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 CRCPO75575 148 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 PDE5AO76074 875 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 NFATC1O95644 943 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 S100BP04271 92 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ALDOCP09972 364 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 OR56A5P0C7T3 313 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 LINC00032P0C843 101 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 CBSLP0DN79 551 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 NFKBIAP25963 317 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 CBSP35520 551 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 MTTPP55157 894 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 PKNOX1P55347 436 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ST8SIA6P61647 398 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ART3Q13508 389 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 GRB7Q14451 532 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 RCN1Q15293 331 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 MAPRE2Q15555 327 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 GAB4Q2WGN9 574 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 C18orf21Q32NC0 220 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 Q6ZVL8 140 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 EFL1Q7Z2Z2 1120 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 PHYKPLQ8IUZ5 450 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 DDIASQ8IXT1 998 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 PDPRQ8NCN5 879 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 FGF13Q92913 245 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ZFYVE19Q96K21 471 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF382Q96SR6 550 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 SPATA16Q9BXB7 569 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ABCG8Q9H221 673 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 EBF3Q9H4W6 596 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 RAD18Q9NS91 495 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 STX18Q9P2W9 335 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 BTRCQ9Y297 605 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 PTGDR2Q9Y5Y4 395 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 OTOL1A6NHN0 477 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 C16orf96A6NNT2 1141 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 PRRT4C9JH25 899 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 TBX10O75333 385 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 SORBS2O94875 1100 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 OR4F21O95013 312 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 SNRPB2P08579 225 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ATP1B2P14415 290 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 LBPP18428 481 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 GPX3P22352 226 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 XPAP23025 273 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 AOAHP28039 575 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 CCR7P32248 378 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ACADVLP49748 655 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ERVPABLB-1P60509 514 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 MESP2Q0VG99 397 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 RALGDSQ12967 914 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 RARS2Q5T160 578 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ICE2Q659A1 982 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 GPRIN3Q6ZVF9 776 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 DPPA4Q7L190 304 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 TECPR1Q7Z6L1 1165 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 HPS6Q86YV9 775 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 PGAM4Q8N0Y7 254 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF366Q8N895 744 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 NUP210Q8TEM1 1887 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 DLG3Q92796 817 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 SCAMP4Q969E2 229 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 NXPE3Q969Y0 559 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 CDRT15Q96T59 188 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 SERPINI1Q99574 410 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 NPAS2Q99743 824 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 FAM83CQ9BQN1 747 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 MRPL1Q9BYD6 325 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 NOL11Q9H8H0 719 aaKnown RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 TRPV4Q9HBA0 871 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 RDH14Q9HBH5 336 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 NDE1Q9NXR1 346 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 CCDC167Q9P0B6 97 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 DEC1Q9P2X7 70 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 MBD1Q9UIS9 605 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-201ENST00000276573 POMPQ9Y244 141 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 C15orf41Q9Y2V0 281 aa9.44□□□□□ -0.9
TRIM55-201ENST00000276573 EIF3FO00303 357 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 OR7A17O14581 309 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GIPC1O14908 333 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 FKBP6O75344 327 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GUCA1CO95843 209 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CHEK2O96017 543 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 ENO3P13929 434 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 VCLP18206 1134 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PTDSS1P48651 473 aaKnown RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 DCDC1P59894 354 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SLC34A1Q06495 639 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GTF2H2Q13888 395 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms