RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CDK18Q07002 472 aa8.78□□□□□ -1
TPM3-201ENST00000271850 FOXM1Q08050 763 aa8.78□□□□□ -1
TPM3-201ENST00000271850 AP1B1Q10567 949 aa8.78□□□□□ -1
TPM3-201ENST00000271850 UBAP2LQ14157 1087 aaKnown RBP8.78□□□□□ -1
TPM3-201ENST00000271850 ERV3-1Q14264 604 aa8.78□□□□□ -1
TPM3-201ENST00000271850 MESDQ14696 234 aa8.78□□□□□ -1
TPM3-201ENST00000271850 KCNAB1Q14722 419 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PTPRCAPQ14761 206 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PRKD1Q15139 912 aaPredicted RBP8.78□□□□□ -1
TPM3-201ENST00000271850 SLC14A2Q15849 920 aa8.78□□□□□ -1
TPM3-201ENST00000271850 SLC18A3Q16572 532 aa8.78□□□□□ -1
TPM3-201ENST00000271850 TAZQ16635 292 aa8.78□□□□□ -1
TPM3-201ENST00000271850 INSCQ1MX18 579 aa8.78□□□□□ -1
TPM3-201ENST00000271850 LINC01559Q495D7 138 aa8.78□□□□□ -1
TPM3-201ENST00000271850 AGAP9Q5VTM2 703 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PDPK2PQ6A1A2 396 aa8.78□□□□□ -1
TPM3-201ENST00000271850 HIST2H2BCQ6DN03 193 aa8.78□□□□□ -1
TPM3-201ENST00000271850 MFSD7Q6UXD7 560 aa8.78□□□□□ -1
TPM3-201ENST00000271850 WASH2PQ6VEQ5 465 aa8.78□□□□□ -1
TPM3-201ENST00000271850 FAM92BQ6ZTR7 304 aa8.78□□□□□ -1
TPM3-201ENST00000271850 NT5DC3Q86UY8 548 aa8.78□□□□□ -1
TPM3-201ENST00000271850 LRRTM4Q86VH4 590 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PLXDC1Q8IUK5 500 aa8.78□□□□□ -1
TPM3-201ENST00000271850 ESX1Q8N693 406 aa8.78□□□□□ -1
TPM3-201ENST00000271850 RASGEF1AQ8N9B8 481 aa8.78□□□□□ -1
TPM3-201ENST00000271850 CCHCR1Q8TD31 782 aa8.78□□□□□ -1
TPM3-201ENST00000271850 APOBEC4Q8WW27 367 aaKnown RBP8.78□□□□□ -1
TPM3-201ENST00000271850 OXNAD1Q96HP4 312 aaPredicted RBP8.78□□□□□ -1
TPM3-201ENST00000271850 SLC41A2Q96JW4 573 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PPM1MQ96MI6 270 aa8.78□□□□□ -1
TPM3-201ENST00000271850 VPS35Q96QK1 796 aa8.78□□□□□ -1
TPM3-201ENST00000271850 CHP1Q99653 195 aa8.78□□□□□ -1
TPM3-201ENST00000271850 NRTNQ99748 197 aa8.78□□□□□ -1
TPM3-201ENST00000271850 SLC25A51Q9H1U9 297 aa8.78□□□□□ -1
TPM3-201ENST00000271850 EPB41L1Q9H4G0 881 aa8.78□□□□□ -1
TPM3-201ENST00000271850 GLOD4Q9HC38 313 aa8.78□□□□□ -1
TPM3-201ENST00000271850 IL26Q9NPH9 171 aa8.78□□□□□ -1
TPM3-201ENST00000271850 WASH6PQ9NQA3 447 aa8.78□□□□□ -1
TPM3-201ENST00000271850 POT1Q9NUX5 634 aa8.78□□□□□ -1
TPM3-201ENST00000271850 IFNKQ9P0W0 207 aa8.78□□□□□ -1
TPM3-201ENST00000271850 EPHA6Q9UF33 1036 aa8.78□□□□□ -1
TPM3-201ENST00000271850 ANAPC2Q9UJX6 822 aa8.78□□□□□ -1
TPM3-201ENST00000271850 MAN2B2Q9Y2E5 1009 aa8.78□□□□□ -1
TPM3-201ENST00000271850 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
TPM3-201ENST00000271850 ICE1Q9Y2F5 2266 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PDZK1P1A8MUH7 402 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 GPR89AB7ZAQ6 455 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 F5H423 210 aaPredicted RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 KMOO15229 486 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 TOX3O15405 576 aaPredicted RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 SGTAO43765 313 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 UGT1A9O60656 530 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 PMPCBO75439 489 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 MTA2O94776 668 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 CDK14O94921 469 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 NDST3O95803 873 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 VIPP01282 170 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 H2AFZP0C0S5 128 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 GPR89BP0CG08 455 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 SLC2A4P14672 509 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 NELFEP18615 380 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 UGT1A6P19224 532 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 UGT1A1P22309 533 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 UGT1A4P22310 534 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 ANP32AP39687 249 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 UQCRFS1P47985 274 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 GSK3AP49840 483 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 MLLT10P55197 1068 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 RPS18P62269 152 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 IL10RAQ13651 578 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 LLGL1Q15334 1064 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 LACTB2Q53H82 288 aaPredicted RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 TEX44Q53QW1 395 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 FAM69BQ5VUD6 431 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 CPZQ66K79 652 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 LCN10Q6JVE6 187 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 PWWP2BQ6NUJ5 590 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 DUS1LQ6P1R4 473 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 FAM199XQ6PEV8 388 aaPredicted RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 C6orf15Q6UXA7 325 aaPredicted RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 H2AFVQ71UI9 128 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 VSIG1Q86XK7 387 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 LILRA3Q8N6C8 439 aaPredicted RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 ZNF511Q8NB15 262 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 SLC38A9Q8NBW4 561 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 SLC35G2Q8TBE7 412 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 CT55Q8WUE5 264 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 KIAA1143Q96AT1 154 aaPredicted RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 TEKT5Q96M29 485 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 PSMG3-AS1Q96PY0 264 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 ADGRE3Q9BY15 652 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 XPO4Q9C0E2 1151 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 RAB33BQ9H082 229 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 TRIT1Q9H3H1 467 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 STN1Q9H668 368 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 UGT1A7Q9HAW7 530 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 UGT1A10Q9HAW8 530 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 UGT1A8Q9HAW9 530 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 LHX9Q9NQ69 397 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms