RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 RALGDSQ12967 914 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 DSELQ8IZU8 1212 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 ZNF366Q8N895 744 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 OR56A4Q8NGH8 313 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 GDPD5Q8WTR4 605 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 ZNF382Q96SR6 550 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 FAM83CQ9BQN1 747 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 NUSAP1Q9BXS6 441 aaKnown RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 NFKBIL1Q9UBC1 381 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 RAD51BO15315 384 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 ANP32DO95626 131 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 MTTPP55157 894 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 C18orf21Q32NC0 220 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 PREPLQ4J6C6 727 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 C1orf146Q5VVC0 180 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 DPPA4Q7L190 304 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 DLG3Q92796 817 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 FAM126AQ9BYI3 521 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 FAM83DQ9H4H8 585 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 TRPV4Q9HBA0 871 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 KCTD5Q9NXV2 234 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 MBD1Q9UIS9 605 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 PTBP2Q9UKA9 531 aaKnown RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 TNPO3Q9Y5L0 923 aaKnown RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 ST14Q9Y5Y6 855 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 RANBP2P49792 3224 aaKnown RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 HEPACAM2A8MVW5 462 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 PSMD12O00232 456 aaPredicted RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 PDE5AO76074 875 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 SORBS2O94875 1100 aaKnown RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 CBSLP0DN79 551 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 UROSP10746 265 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 FCARP24071 287 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 CCR7P32248 378 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 CBSP35520 551 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 MAGEA10P43363 369 aaPredicted RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 CCNG1P51959 295 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 CDC16Q13042 620 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 FASTKQ14296 549 aaKnown RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 RCN1Q15293 331 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 PHKG1Q16816 387 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 TTLL9Q3SXZ7 439 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 RARS2Q5T160 578 aaKnown RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 C6orf163Q5TEZ5 329 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 C16orf89Q6UX73 402 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 GK5Q6ZS86 529 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 GPRIN3Q6ZVF9 776 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 Q6ZVL8 140 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 MYLK4Q86YV6 388 aaPredicted RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 FBXW8Q8N3Y1 598 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 SCAMP4Q969E2 229 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 SPATA16Q9BXB7 569 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 PBX4Q9BYU1 374 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 NSUN3Q9H649 340 aaKnown RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 OBP2AQ9NY56 170 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 GDE1Q9NZC3 331 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 POLG2Q9UHN1 485 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 PRPF19Q9UMS4 504 aaKnown RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 BTRCQ9Y297 605 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 TIMM22Q9Y584 194 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 PLXNA2O75051 1894 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 MUC22E2RYF6 1773 aaPredicted RBP16.37■□□□□ 0.21
CCDC40-201ENST00000269318 EPOPA6NHQ4 379 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 C16orf96A6NNT2 1141 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 TAPBPO15533 448 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 ETV3P41162 512 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 PKNOX1P55347 436 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 ST8SIA6P61647 398 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 GRB7Q14451 532 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 GBX1Q14549 363 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 RBBP7Q16576 425 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 XKR7Q5GH72 579 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 DDIASQ8IXT1 998 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 OR52B6Q8NGF0 335 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 STMN2Q93045 179 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 EFCAB1Q9HAE3 211 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 DZANK1Q9NVP4 752 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 GIMAP2Q9UG22 337 aa16.37■□□□□ 0.21
CCDC40-201ENST00000269318 COL4A3Q01955 1670 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 OR56A5P0C7T3 313 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 LINC00032P0C843 101 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 PRR35P0CG20 571 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 GPX3P22352 226 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 NFKBIAP25963 317 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 AOAHP28039 575 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 MMP12P39900 470 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 ACADVLP49748 655 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 ERVPABLB-1P60509 514 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 ZRSR2Q15696 482 aaKnown RBP16.36■□□□□ 0.21
CCDC40-201ENST00000269318 HENMT1Q5T8I9 393 aaKnown RBP16.36■□□□□ 0.21
CCDC40-201ENST00000269318 PARS2Q7L3T8 475 aaKnown RBP16.36■□□□□ 0.21
CCDC40-201ENST00000269318 GET4Q7L5D6 327 aaPredicted RBP16.36■□□□□ 0.21
CCDC40-201ENST00000269318 EFL1Q7Z2Z2 1120 aaKnown RBP16.36■□□□□ 0.21
CCDC40-201ENST00000269318 GOLGA7Q7Z5G4 137 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 TECPR1Q7Z6L1 1165 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 HPS6Q86YV9 775 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 PGAM4Q8N0Y7 254 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 ST13P5Q8NFI4 369 aaPredicted RBP16.36■□□□□ 0.21
CCDC40-201ENST00000269318 CDCA3Q99618 268 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms