RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 J3KR12 359 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ARPC2O15144 300 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 KIF19Q2TAC6 998 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ALFQ53S48 1182 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 BRMS1LQ5PSV4 323 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 IL31Q6EBC2 164 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PLEKHG7Q6ZR37 379 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RFPL4BQ6ZWI9 263 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SLC22A16Q86VW1 577 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PNPT1Q8TCS8 783 aaKnown RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ROPN1LQ96C74 230 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PHF21BQ96EK2 531 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TTPALQ9BTX7 342 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CMTM6Q9NX76 183 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 HACD3Q9P035 362 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TBC1D14Q9P2M4 693 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TRIOO75962 3097 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 NLRC5Q86WI3 1866 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 A0A0J9YYE9 177 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MATN3O15232 486 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ALDOCP09972 364 aaKnown RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 NCK1P16333 377 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ATP5F1P24539 256 aaPredicted RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MLLT6P55198 1093 aaPredicted RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ADARB1P78563 741 aaKnown RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 OTUD3Q5T2D3 398 aaPredicted RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MANEALQ5VSG8 457 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 C1orf53Q5VUE5 145 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 BROXQ5VW32 411 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 GTF2IRD2BQ6EKJ0 949 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 DENND5AQ6IQ26 1287 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 LCN8Q6JVE9 175 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 UGT3A1Q6NUS8 523 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 GTF2IRD2Q86UP8 949 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SFRP1Q8N474 314 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PABPC5Q96DU9 382 aaKnown RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 NRBF2Q96F24 287 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CEP295NLQ96MC4 621 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 YTHDF1Q9BYJ9 559 aaKnown RBP15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ADNPQ9H2P0 1102 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 DOCK6Q96HP0 2047 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PTPRDP23468 1912 aa15.78■□□□□ 0.12
MAP1LC3B-201ENST00000268607 C7P10643 843 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 HAPLN1P10915 354 aaPredicted RBP15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 GFAPP14136 432 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MYOGP15173 224 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 JUNBP17275 347 aaPredicted RBP15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SHMT2P34897 504 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RFC2P35250 354 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CSHL1Q14406 222 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CYHR1Q6ZMK1 362 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 AKAP14Q86UN6 197 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 AFAP1L2Q8N4X5 818 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MINDY2Q8NBR6 621 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 IGSF21Q96ID5 467 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ELMO2Q96JJ3 720 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 C3orf30Q96M34 536 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MRPL57Q9BQC6 102 aaKnown RBP15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 FSD1LQ9BXM9 530 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TRIT1Q9H3H1 467 aaKnown RBP15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RMND5AQ9H871 391 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 AKIP1Q9NQ31 210 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ACTR3BQ9P1U1 418 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 GIMAP2Q9UG22 337 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ZNF229Q9UJW7 825 aa15.77■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ILVBLA1L0T0 632 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 MAGEB16A2A368 324 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 BCAS1O75363 584 aaPredicted RBP15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 TUFMP49411 452 aaKnown RBP15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 TBX4P57082 545 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 STX1BP61266 288 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 FAM83EQ2M2I3 478 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 CRTC3Q6UUV7 619 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 MON1AQ86VX9 555 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 SCML4Q8N228 414 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 TSGA13Q96PP4 275 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 ZBED2Q9BTP6 218 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 DGCR6LQ9BY27 220 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 ING2Q9H160 280 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 NT5MQ9NPB1 228 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 MRGBPQ9NV56 204 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 ABCD2Q9UBJ2 740 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 AAR2Q9Y312 384 aaKnown RBP15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 VWA7Q9Y334 891 aa15.77■□□□□ 0.11
MAP1LC3B-201ENST00000268607 TNRC18O15417 2968 aaPredicted RBP15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 GRXCR1A8MXD5 290 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 XYLBO75191 536 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 GPX3P22352 226 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 LEPRP48357 1165 aaKnown RBP15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 ZNF135P52742 658 aaPredicted RBP15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 TAS2R39P59534 338 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 PIGFQ07326 219 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 PRR23BQ6ZRT6 265 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 LARP4Q71RC2 724 aaKnown RBP eCLIP15.76■□□□□ 0.112e-6■■■□□ 16
MAP1LC3B-201ENST00000268607 C11orf74Q86VG3 221 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 GALNT13Q8IUC8 556 aa15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 DCP1BQ8IZD4 617 aaKnown RBP15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 RTL3Q8N8U3 475 aaKnown RBP15.76■□□□□ 0.11
MAP1LC3B-201ENST00000268607 HMCESQ96FZ2 354 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms