RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 AZIN1O14977 448 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 CALCAP01258 141 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 CD6P30203 668 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 TMEM240Q5SV17 173 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 NUDT13Q86X67 352 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 UMODL1-AS1Q8N2C9 162 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 ART4Q93070 314 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 MOAP1Q96BY2 351 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 THAP11Q96EK4 314 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 C5orf34Q96MH7 638 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 AARSD1Q9BTE6 412 aaKnown RBP13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 ZBP1Q9H171 429 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 PCED1AQ9H1Q7 454 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 TMBIM4Q9HC24 238 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 STON1Q9Y6Q2 735 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 H0Y858 1186 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 GPR37L1O60883 481 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 FASTKQ14296 549 aaKnown RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ARHGAP40Q5TG30 622 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 CDC73Q6P1J9 531 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 P4HA3Q7Z4N8 544 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 OR6K2Q8NGY2 324 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF563Q8TA94 476 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 FBXO25Q8TCJ0 367 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 MAGED4Q96JG8 741 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF717Q9BY31 904 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ACTL8Q9H568 366 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 TPP1O14773 563 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 TMCC2O75069 709 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 CXCL10P02778 98 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ITGA2BP08514 1039 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 NUDT17P0C025 328 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 UNGP13051 313 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ETS1P14921 441 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 PDK4Q16654 411 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 CPTPQ5TA50 214 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 LYSMD3Q7Z3D4 306 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC44A2Q8IWA5 706 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ATXN2LQ8WWM7 1075 aaKnown RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 CRELD1Q96HD1 420 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 GFM1Q96RP9 751 aaKnown RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 BDH2Q9BUT1 245 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 CHURC1-FNTBB4DL54 471 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 CPN2P22792 545 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 KHKP50053 298 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 GATMP50440 423 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 YPEL5P62699 121 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 AMZ1Q400G9 498 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 GPAT3Q53EU6 434 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 PARGQ86W56 976 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 RASGEF1CQ8N431 466 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 DENND6BQ8NEG7 585 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC29A3Q9BZD2 475 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 EPB41L4BQ9H329 900 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 LINC01553A4QN01 128 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 SCAMP3O14828 347 aaKnown RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 GALNT2Q10471 571 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 SEMA5AQ13591 1074 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 KLHL24Q6TFL4 600 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 NYAP1Q6ZVC0 841 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 TMPRSS11BQ86T26 416 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 KYQ8NBH2 561 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 RGMAQ96B86 450 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 DACH2Q96NX9 599 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 DGAT2Q96PD7 388 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 APOBEC3BQ9UH17 382 aaKnown RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 NRG1Q02297 640 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC9A5Q14940 896 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 FAM171BQ6P995 826 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF621Q6ZSS3 439 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 TMEM26Q6ZUK4 368 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 ZC3H3Q8IXZ2 948 aaKnown RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 Q96MT0 163 aa13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 POLR3BQ9NW08 1133 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-201ENST00000257181 MCIDASD6RGH6 385 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 NUDT2P50583 147 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 SCAPQ12770 1279 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 BNIP2Q12982 314 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ADRM1Q16186 407 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 TFAP2BQ92481 460 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ZBTB10Q96DT7 871 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 PTPRHQ9HD43 1115 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 TAF4O00268 1085 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 BCAS2O75934 225 aaPredicted RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 NT5EP21589 574 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 UGT1A5P35504 534 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 MANFP55145 182 aaKnown RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 FAM189BP81408 668 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 MINDY4Q4G0A6 757 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 SDR16C5Q8N3Y7 309 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 IL22RA1Q8N6P7 574 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 TXNDC5Q8NBS9 432 aaKnown RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 FKBP10Q96AY3 582 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 TLR10Q9BXR5 811 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ADNPQ9H2P0 1102 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 NMUR1Q9HB89 426 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 DDX18Q9NVP1 670 aaKnown RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 SIRPGQ9P1W8 387 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms